Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0993 and Dsui_0994 overlap by 1 nucleotides Dsui_0994 and Dsui_0995 are separated by 18 nucleotides Dsui_0995 and Dsui_0996 are separated by 75 nucleotides
Dsui_0993: Dsui_0993 - polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase, at 1,019,699 to 1,020,316
_0993
Dsui_0994: Dsui_0994 - peptidase S16, lon domain protein, at 1,020,316 to 1,020,957
_0994
Dsui_0995: Dsui_0995 - arabinose efflux permease family protein, at 1,020,976 to 1,022,196
_0995
Dsui_0996: Dsui_0996 - soluble lytic murein transglycosylase-like protein, at 1,022,272 to 1,022,979
_0996
Position (kb)
1020
1021
1022
1023 Strain fitness (log2 ratio)
-1
0
1
2 at 1020.458 kb on - strand, within Dsui_0994 at 1020.463 kb on - strand at 1020.500 kb on - strand, within Dsui_0994 at 1020.514 kb on + strand, within Dsui_0994 at 1020.730 kb on + strand, within Dsui_0994 at 1020.747 kb on - strand, within Dsui_0994 at 1020.951 kb on + strand at 1020.976 kb on - strand at 1021.067 kb on - strand at 1021.244 kb on - strand, within Dsui_0995 at 1021.389 kb on + strand, within Dsui_0995 at 1021.476 kb on - strand, within Dsui_0995 at 1021.640 kb on + strand, within Dsui_0995 at 1021.648 kb on - strand, within Dsui_0995 at 1021.648 kb on - strand at 1021.696 kb on - strand at 1021.811 kb on - strand, within Dsui_0995 at 1021.971 kb on - strand, within Dsui_0995 at 1022.011 kb on + strand, within Dsui_0995 at 1022.050 kb on + strand, within Dsui_0995 at 1022.123 kb on + strand at 1022.131 kb on - strand at 1022.159 kb on - strand at 1022.185 kb on + strand at 1022.239 kb on + strand at 1022.339 kb on + strand at 1022.344 kb on + strand, within Dsui_0996 at 1022.552 kb on + strand, within Dsui_0996 at 1022.643 kb on - strand, within Dsui_0996 at 1022.701 kb on + strand, within Dsui_0996 at 1022.701 kb on + strand, within Dsui_0996 at 1022.709 kb on - strand, within Dsui_0996 at 1022.901 kb on + strand, within Dsui_0996 at 1022.906 kb on + strand, within Dsui_0996 at 1022.909 kb on - strand at 1022.919 kb on - strand at 1023.015 kb on + strand at 1023.034 kb on - strand at 1023.121 kb on + strand at 1023.131 kb on + strand at 1023.132 kb on + strand at 1023.133 kb on + strand at 1023.141 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 1,020,458 - Dsui_0994 0.22 -0.6 1,020,463 - +0.7 1,020,500 - Dsui_0994 0.29 +1.0 1,020,514 + Dsui_0994 0.31 +0.5 1,020,730 + Dsui_0994 0.64 -0.2 1,020,747 - Dsui_0994 0.67 -0.5 1,020,951 + +0.0 1,020,976 - -0.3 1,021,067 - +1.9 1,021,244 - Dsui_0995 0.22 +0.4 1,021,389 + Dsui_0995 0.34 +0.6 1,021,476 - Dsui_0995 0.41 +0.2 1,021,640 + Dsui_0995 0.54 +0.3 1,021,648 - Dsui_0995 0.55 +0.6 1,021,648 - +0.7 1,021,696 - -0.6 1,021,811 - Dsui_0995 0.68 +1.2 1,021,971 - Dsui_0995 0.81 +0.9 1,022,011 + Dsui_0995 0.85 +0.2 1,022,050 + Dsui_0995 0.88 -0.4 1,022,123 + +0.1 1,022,131 - +0.1 1,022,159 - -0.1 1,022,185 + -0.2 1,022,239 + -0.1 1,022,339 + +0.1 1,022,344 + Dsui_0996 0.10 -0.2 1,022,552 + Dsui_0996 0.40 +0.6 1,022,643 - Dsui_0996 0.52 +0.7 1,022,701 + Dsui_0996 0.61 +1.3 1,022,701 + Dsui_0996 0.61 -0.2 1,022,709 - Dsui_0996 0.62 +0.9 1,022,901 + Dsui_0996 0.89 -0.9 1,022,906 + Dsui_0996 0.90 +0.9 1,022,909 - +0.2 1,022,919 - +0.7 1,023,015 + -0.3 1,023,034 - -0.3 1,023,121 + +1.1 1,023,131 + -0.6 1,023,132 + +0.2 1,023,133 + +0.1 1,023,141 - -0.0
Or see this region's nucleotide sequence