Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0989 and Dsui_0990 are separated by 156 nucleotides Dsui_0990 and Dsui_0991 overlap by 14 nucleotides Dsui_0991 and Dsui_0992 overlap by 20 nucleotides Dsui_0992 and Dsui_0993 overlap by 8 nucleotides
Dsui_0989: Dsui_0989 - amidohydrolase, at 1,016,543 to 1,017,706
_0989
Dsui_0990: Dsui_0990 - putative P-loop-containing kinase, at 1,017,863 to 1,018,735
_0990
Dsui_0991: Dsui_0991 - hypothetical protein, at 1,018,722 to 1,019,150
_0991
Dsui_0992: Dsui_0992 - putative membrane protein, at 1,019,131 to 1,019,706
_0992
Dsui_0993: Dsui_0993 - polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase, at 1,019,699 to 1,020,316
_0993
Position (kb)
1017
1018
1019 Strain fitness (log2 ratio)
-2
-1
0
1 at 1016.951 kb on + strand, within Dsui_0989 at 1016.956 kb on + strand, within Dsui_0989 at 1016.956 kb on + strand, within Dsui_0989 at 1016.994 kb on + strand at 1017.002 kb on - strand, within Dsui_0989 at 1017.009 kb on + strand, within Dsui_0989 at 1017.034 kb on + strand, within Dsui_0989 at 1017.064 kb on - strand, within Dsui_0989 at 1017.066 kb on + strand, within Dsui_0989 at 1017.233 kb on + strand, within Dsui_0989 at 1017.331 kb on + strand, within Dsui_0989 at 1017.332 kb on - strand, within Dsui_0989 at 1017.566 kb on - strand, within Dsui_0989 at 1017.690 kb on + strand at 1017.708 kb on - strand at 1017.743 kb on + strand at 1017.753 kb on + strand at 1017.804 kb on + strand at 1017.809 kb on + strand at 1017.809 kb on + strand at 1017.809 kb on + strand at 1018.374 kb on + strand, within Dsui_0990 at 1018.764 kb on + strand at 1018.824 kb on - strand at 1018.935 kb on - strand at 1019.036 kb on - strand, within Dsui_0991 at 1019.279 kb on + strand, within Dsui_0992 at 1019.433 kb on + strand, within Dsui_0992 at 1019.488 kb on - strand at 1019.701 kb on + strand at 1019.709 kb on - strand at 1019.709 kb on - strand at 1019.709 kb on - strand at 1019.709 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 1,016,951 + Dsui_0989 0.35 +0.3 1,016,956 + Dsui_0989 0.35 +1.2 1,016,956 + Dsui_0989 0.35 +0.6 1,016,994 + +1.3 1,017,002 - Dsui_0989 0.39 +0.2 1,017,009 + Dsui_0989 0.40 +0.3 1,017,034 + Dsui_0989 0.42 -0.4 1,017,064 - Dsui_0989 0.45 -0.1 1,017,066 + Dsui_0989 0.45 -0.0 1,017,233 + Dsui_0989 0.59 -0.4 1,017,331 + Dsui_0989 0.68 -0.1 1,017,332 - Dsui_0989 0.68 +0.0 1,017,566 - Dsui_0989 0.88 -0.0 1,017,690 + +0.1 1,017,708 - -0.3 1,017,743 + +0.1 1,017,753 + +0.5 1,017,804 + +1.7 1,017,809 + +0.1 1,017,809 + -0.8 1,017,809 + -0.0 1,018,374 + Dsui_0990 0.59 -0.9 1,018,764 + +0.7 1,018,824 - +0.1 1,018,935 - +0.7 1,019,036 - Dsui_0991 0.73 +0.5 1,019,279 + Dsui_0992 0.26 -1.8 1,019,433 + Dsui_0992 0.52 -1.3 1,019,488 - +1.1 1,019,701 + +0.0 1,019,709 - -0.6 1,019,709 - +0.1 1,019,709 - +0.3 1,019,709 - -0.7
Or see this region's nucleotide sequence