Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0708 and Dsui_0709 are separated by 64 nucleotides Dsui_0709 and Dsui_0710 are separated by 54 nucleotides Dsui_0710 and Dsui_0711 overlap by 4 nucleotides
Dsui_0708: Dsui_0708 - PAS domain S-box, at 702,724 to 704,817
_0708
Dsui_0709: Dsui_0709 - bacterioferritin, at 704,882 to 705,361
_0709
Dsui_0710: Dsui_0710 - competence/damage-inducible protein CinA-like protein, at 705,416 to 705,931
_0710
Dsui_0711: Dsui_0711 - phosphatidylglycerophosphatase A-like protein, at 705,928 to 706,446
_0711
Position (kb) 704
705
706 Strain fitness (log2 ratio) -1
0
1
2
3 at 703.969 kb on - strand, within Dsui_0708 at 703.988 kb on - strand, within Dsui_0708 at 703.997 kb on + strand, within Dsui_0708 at 704.093 kb on + strand at 704.142 kb on - strand, within Dsui_0708 at 704.190 kb on + strand, within Dsui_0708 at 704.199 kb on - strand at 704.211 kb on + strand, within Dsui_0708 at 704.226 kb on + strand, within Dsui_0708 at 704.234 kb on - strand, within Dsui_0708 at 704.338 kb on + strand, within Dsui_0708 at 704.423 kb on - strand at 704.428 kb on - strand, within Dsui_0708 at 704.485 kb on + strand, within Dsui_0708 at 704.527 kb on - strand, within Dsui_0708 at 704.548 kb on - strand, within Dsui_0708 at 704.560 kb on - strand at 704.560 kb on - strand, within Dsui_0708 at 704.595 kb on + strand, within Dsui_0708 at 704.614 kb on - strand at 704.632 kb on - strand at 704.701 kb on - strand at 704.763 kb on - strand at 704.764 kb on - strand at 704.821 kb on + strand at 705.026 kb on - strand, within Dsui_0709 at 705.078 kb on - strand, within Dsui_0709 at 705.162 kb on + strand, within Dsui_0709 at 705.175 kb on + strand, within Dsui_0709 at 705.180 kb on + strand, within Dsui_0709 at 705.324 kb on + strand at 705.334 kb on + strand at 705.414 kb on + strand at 705.535 kb on - strand, within Dsui_0710 at 705.541 kb on - strand, within Dsui_0710 at 705.654 kb on + strand, within Dsui_0710 at 705.715 kb on - strand, within Dsui_0710 at 705.786 kb on - strand, within Dsui_0710 at 705.897 kb on + strand at 705.898 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 703,969 - Dsui_0708 0.59 +0.2 703,988 - Dsui_0708 0.60 +0.2 703,997 + Dsui_0708 0.61 +0.5 704,093 + +3.2 704,142 - Dsui_0708 0.68 +0.4 704,190 + Dsui_0708 0.70 +0.4 704,199 - +0.1 704,211 + Dsui_0708 0.71 +0.1 704,226 + Dsui_0708 0.72 +0.2 704,234 - Dsui_0708 0.72 +1.0 704,338 + Dsui_0708 0.77 -0.2 704,423 - +1.7 704,428 - Dsui_0708 0.81 -0.5 704,485 + Dsui_0708 0.84 +1.3 704,527 - Dsui_0708 0.86 -0.0 704,548 - Dsui_0708 0.87 +1.0 704,560 - +1.1 704,560 - Dsui_0708 0.88 -0.3 704,595 + Dsui_0708 0.89 -0.2 704,614 - +0.3 704,632 - +1.2 704,701 - -0.1 704,763 - +0.2 704,764 - +0.3 704,821 + +0.4 705,026 - Dsui_0709 0.30 +0.4 705,078 - Dsui_0709 0.41 +0.1 705,162 + Dsui_0709 0.58 +0.3 705,175 + Dsui_0709 0.61 +0.7 705,180 + Dsui_0709 0.62 +0.4 705,324 + +0.9 705,334 + +0.3 705,414 + -1.3 705,535 - Dsui_0710 0.23 +0.1 705,541 - Dsui_0710 0.24 -0.9 705,654 + Dsui_0710 0.46 -1.0 705,715 - Dsui_0710 0.58 -0.0 705,786 - Dsui_0710 0.72 -0.7 705,897 + -0.7 705,898 + +0.4
Or see this region's nucleotide sequence