Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0698 and Dsui_0699 are separated by 16 nucleotides Dsui_0699 and Dsui_0700 are separated by 121 nucleotides Dsui_0700 and Dsui_0701 are separated by 45 nucleotides Dsui_0701 and Dsui_0702 overlap by 32 nucleotides
Dsui_0698: Dsui_0698 - hypothetical protein, at 694,903 to 695,718
_0698
Dsui_0699: Dsui_0699 - hypothetical protein, at 695,735 to 696,406
_0699
Dsui_0700: Dsui_0700 - psiF repeat protein, at 696,528 to 696,842
_0700
Dsui_0701: Dsui_0701 - serine kinase of the HPr protein, regulates carbohydrate metabolism, at 696,888 to 697,823
_0701
Dsui_0702: Dsui_0702 - PTS IIA-like nitrogen-regulatory protein PtsN, at 697,792 to 698,277
_0702
Position (kb) 696
697 Strain fitness (log2 ratio) -2
-1
0
1 at 695.535 kb on - strand, within Dsui_0698 at 695.552 kb on + strand, within Dsui_0698 at 695.552 kb on + strand, within Dsui_0698 at 695.583 kb on - strand, within Dsui_0698 at 695.584 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.632 kb on + strand, within Dsui_0698 at 695.652 kb on - strand at 695.659 kb on + strand at 695.686 kb on + strand at 695.686 kb on + strand at 695.733 kb on - strand at 695.765 kb on - strand at 695.786 kb on - strand at 695.793 kb on + strand at 695.793 kb on + strand at 695.805 kb on + strand, within Dsui_0699 at 695.815 kb on + strand, within Dsui_0699 at 695.816 kb on + strand, within Dsui_0699 at 695.861 kb on - strand, within Dsui_0699 at 695.861 kb on - strand, within Dsui_0699 at 695.864 kb on + strand, within Dsui_0699 at 695.909 kb on + strand, within Dsui_0699 at 695.929 kb on - strand, within Dsui_0699 at 695.931 kb on - strand, within Dsui_0699 at 695.944 kb on + strand, within Dsui_0699 at 695.959 kb on - strand, within Dsui_0699 at 696.017 kb on + strand, within Dsui_0699 at 696.017 kb on + strand, within Dsui_0699 at 696.070 kb on - strand, within Dsui_0699 at 696.093 kb on - strand, within Dsui_0699 at 696.104 kb on + strand at 696.356 kb on - strand at 696.463 kb on - strand at 696.551 kb on - strand at 696.615 kb on - strand, within Dsui_0700 at 696.615 kb on - strand, within Dsui_0700 at 696.797 kb on + strand, within Dsui_0700 at 696.812 kb on + strand at 696.814 kb on - strand at 696.973 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 695,535 - Dsui_0698 0.77 +0.3 695,552 + Dsui_0698 0.80 -0.4 695,552 + Dsui_0698 0.80 +0.1 695,583 - Dsui_0698 0.83 -0.3 695,584 - Dsui_0698 0.83 +0.0 695,615 - Dsui_0698 0.87 -0.1 695,615 - Dsui_0698 0.87 -0.1 695,615 - Dsui_0698 0.87 +0.1 695,615 - Dsui_0698 0.87 -0.3 695,632 + Dsui_0698 0.89 +0.9 695,652 - +0.2 695,659 + -0.2 695,686 + -0.4 695,686 + +0.2 695,733 - +0.4 695,765 - +0.3 695,786 - +0.4 695,793 + +0.6 695,793 + -0.1 695,805 + Dsui_0699 0.10 +0.6 695,815 + Dsui_0699 0.12 +0.0 695,816 + Dsui_0699 0.12 -0.3 695,861 - Dsui_0699 0.19 -0.5 695,861 - Dsui_0699 0.19 -0.1 695,864 + Dsui_0699 0.19 -1.9 695,909 + Dsui_0699 0.26 -0.1 695,929 - Dsui_0699 0.29 -0.0 695,931 - Dsui_0699 0.29 +0.3 695,944 + Dsui_0699 0.31 -0.0 695,959 - Dsui_0699 0.33 +0.1 696,017 + Dsui_0699 0.42 -0.5 696,017 + Dsui_0699 0.42 -0.0 696,070 - Dsui_0699 0.50 -0.4 696,093 - Dsui_0699 0.53 -0.4 696,104 + +0.1 696,356 - -0.2 696,463 - -0.2 696,551 - -0.0 696,615 - Dsui_0700 0.28 +0.4 696,615 - Dsui_0700 0.28 -0.3 696,797 + Dsui_0700 0.85 +0.8 696,812 + -0.2 696,814 - -0.1 696,973 - +0.4
Or see this region's nucleotide sequence