Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0607 and Dsui_0608 overlap by 7 nucleotides Dsui_0608 and Dsui_0609 are separated by 50 nucleotides Dsui_0609 and Dsui_0610 are separated by 21 nucleotides
Dsui_0607: Dsui_0607 - putative membrane protein, at 602,443 to 602,859
_0607
Dsui_0608: Dsui_0608 - nucleoside-diphosphate-sugar epimerase, at 602,853 to 603,758
_0608
Dsui_0609: Dsui_0609 - 2-polyprenylphenol hydroxylase-like oxidoreductase, at 603,809 to 604,822
_0609
Dsui_0610: Dsui_0610 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 604,844 to 606,016
_0610
Position (kb) 603
604
605 Strain fitness (log2 ratio) -1
0
1
2 at 602.894 kb on + strand at 602.905 kb on + strand at 603.018 kb on + strand at 603.041 kb on + strand, within Dsui_0608 at 603.207 kb on - strand, within Dsui_0608 at 603.207 kb on - strand, within Dsui_0608 at 603.288 kb on - strand, within Dsui_0608 at 603.394 kb on + strand at 603.394 kb on + strand, within Dsui_0608 at 603.417 kb on - strand, within Dsui_0608 at 603.435 kb on + strand at 603.436 kb on - strand, within Dsui_0608 at 603.454 kb on - strand, within Dsui_0608 at 603.454 kb on - strand, within Dsui_0608 at 603.481 kb on + strand, within Dsui_0608 at 603.494 kb on - strand, within Dsui_0608 at 603.560 kb on - strand, within Dsui_0608 at 603.571 kb on - strand, within Dsui_0608 at 603.710 kb on + strand at 603.715 kb on + strand at 603.841 kb on + strand at 603.891 kb on + strand at 603.896 kb on + strand at 603.896 kb on + strand at 604.048 kb on + strand, within Dsui_0609 at 604.048 kb on + strand, within Dsui_0609 at 604.056 kb on - strand, within Dsui_0609 at 604.056 kb on - strand at 604.056 kb on - strand, within Dsui_0609 at 604.066 kb on - strand, within Dsui_0609 at 604.105 kb on + strand, within Dsui_0609 at 604.113 kb on - strand, within Dsui_0609 at 604.305 kb on + strand, within Dsui_0609 at 604.383 kb on - strand, within Dsui_0609 at 604.393 kb on - strand, within Dsui_0609 at 604.403 kb on - strand, within Dsui_0609 at 604.420 kb on - strand, within Dsui_0609 at 604.433 kb on - strand, within Dsui_0609 at 604.501 kb on - strand, within Dsui_0609 at 604.515 kb on - strand, within Dsui_0609 at 604.708 kb on + strand, within Dsui_0609 at 604.735 kb on + strand at 604.873 kb on + strand at 604.913 kb on - strand at 605.000 kb on + strand, within Dsui_0610 at 605.147 kb on + strand, within Dsui_0610 at 605.155 kb on - strand, within Dsui_0610 at 605.186 kb on + strand, within Dsui_0610 at 605.194 kb on - strand, within Dsui_0610 at 605.220 kb on + strand, within Dsui_0610 at 605.228 kb on - strand, within Dsui_0610 at 605.235 kb on + strand, within Dsui_0610 at 605.243 kb on - strand, within Dsui_0610 at 605.415 kb on + strand, within Dsui_0610 at 605.427 kb on + strand, within Dsui_0610 at 605.650 kb on + strand, within Dsui_0610 at 605.691 kb on - strand, within Dsui_0610 at 605.771 kb on - strand, within Dsui_0610 at 605.778 kb on + strand, within Dsui_0610 at 605.786 kb on - strand, within Dsui_0610 at 605.796 kb on + strand, within Dsui_0610
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 602,894 + +0.7 602,905 + -0.1 603,018 + +0.7 603,041 + Dsui_0608 0.21 +0.8 603,207 - Dsui_0608 0.39 -0.9 603,207 - Dsui_0608 0.39 +0.5 603,288 - Dsui_0608 0.48 -1.3 603,394 + +1.7 603,394 + Dsui_0608 0.60 +0.7 603,417 - Dsui_0608 0.62 +0.4 603,435 + +0.1 603,436 - Dsui_0608 0.64 -0.6 603,454 - Dsui_0608 0.66 -0.3 603,454 - Dsui_0608 0.66 -0.6 603,481 + Dsui_0608 0.69 -0.4 603,494 - Dsui_0608 0.71 +0.1 603,560 - Dsui_0608 0.78 -0.4 603,571 - Dsui_0608 0.79 +0.7 603,710 + -0.6 603,715 + -0.2 603,841 + +0.0 603,891 + +1.1 603,896 + +0.3 603,896 + +1.0 604,048 + Dsui_0609 0.24 +0.5 604,048 + Dsui_0609 0.24 +0.5 604,056 - Dsui_0609 0.24 -0.5 604,056 - +2.2 604,056 - Dsui_0609 0.24 +2.2 604,066 - Dsui_0609 0.25 +0.4 604,105 + Dsui_0609 0.29 +1.0 604,113 - Dsui_0609 0.30 +1.2 604,305 + Dsui_0609 0.49 -0.3 604,383 - Dsui_0609 0.57 +0.8 604,393 - Dsui_0609 0.58 +2.2 604,403 - Dsui_0609 0.59 +1.8 604,420 - Dsui_0609 0.60 -0.9 604,433 - Dsui_0609 0.62 +1.4 604,501 - Dsui_0609 0.68 -0.1 604,515 - Dsui_0609 0.70 +1.4 604,708 + Dsui_0609 0.89 +0.4 604,735 + +1.2 604,873 + +0.2 604,913 - +1.4 605,000 + Dsui_0610 0.13 +0.1 605,147 + Dsui_0610 0.26 +0.3 605,155 - Dsui_0610 0.27 +0.5 605,186 + Dsui_0610 0.29 -0.3 605,194 - Dsui_0610 0.30 +0.2 605,220 + Dsui_0610 0.32 +0.1 605,228 - Dsui_0610 0.33 -0.1 605,235 + Dsui_0610 0.33 +0.8 605,243 - Dsui_0610 0.34 -1.0 605,415 + Dsui_0610 0.49 -1.0 605,427 + Dsui_0610 0.50 -0.9 605,650 + Dsui_0610 0.69 +0.1 605,691 - Dsui_0610 0.72 -0.5 605,771 - Dsui_0610 0.79 +1.1 605,778 + Dsui_0610 0.80 -0.0 605,786 - Dsui_0610 0.80 -0.3 605,796 + Dsui_0610 0.81 +2.7
Or see this region's nucleotide sequence