Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0548 and Dsui_0549 overlap by 1 nucleotides Dsui_0549 and Dsui_0550 are separated by 240 nucleotides
Dsui_0548: Dsui_0548 - putative transporter component, at 551,259 to 552,365
_0548
Dsui_0549: Dsui_0549 - queuosine biosynthesis protein QueC, at 552,365 to 553,054
_0549
Dsui_0550: Dsui_0550 - nitrogenase molybdenum-iron cofactor biosynthesis protein NifE, at 553,295 to 554,752
_0550
Position (kb) 552
553
554 Strain fitness (log2 ratio) -2
-1
0
1
2 at 551.391 kb on - strand, within Dsui_0548 at 551.529 kb on - strand, within Dsui_0548 at 551.585 kb on + strand at 551.616 kb on + strand, within Dsui_0548 at 551.943 kb on - strand, within Dsui_0548 at 552.007 kb on - strand, within Dsui_0548 at 552.127 kb on - strand, within Dsui_0548 at 552.191 kb on - strand, within Dsui_0548 at 552.306 kb on - strand at 552.487 kb on + strand at 552.551 kb on + strand, within Dsui_0549 at 552.559 kb on - strand, within Dsui_0549 at 552.591 kb on - strand, within Dsui_0549 at 552.619 kb on + strand at 552.702 kb on + strand at 552.705 kb on - strand, within Dsui_0549 at 552.717 kb on + strand at 552.717 kb on + strand at 552.730 kb on - strand, within Dsui_0549 at 552.745 kb on - strand, within Dsui_0549 at 552.768 kb on - strand, within Dsui_0549 at 552.808 kb on + strand, within Dsui_0549 at 552.862 kb on - strand at 552.955 kb on + strand at 553.058 kb on - strand at 553.068 kb on - strand at 553.114 kb on + strand at 553.192 kb on + strand at 553.219 kb on + strand at 553.219 kb on + strand at 553.227 kb on - strand at 553.229 kb on + strand at 553.231 kb on + strand at 553.357 kb on + strand at 553.363 kb on + strand at 553.418 kb on + strand at 553.481 kb on + strand, within Dsui_0550 at 553.595 kb on - strand, within Dsui_0550 at 553.598 kb on + strand, within Dsui_0550 at 553.606 kb on - strand, within Dsui_0550 at 553.606 kb on - strand, within Dsui_0550 at 553.711 kb on + strand, within Dsui_0550 at 553.723 kb on + strand, within Dsui_0550 at 553.731 kb on - strand, within Dsui_0550 at 553.804 kb on - strand, within Dsui_0550 at 553.810 kb on + strand, within Dsui_0550 at 553.861 kb on + strand, within Dsui_0550 at 553.878 kb on + strand, within Dsui_0550 at 553.886 kb on - strand, within Dsui_0550 at 554.048 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 551,391 - Dsui_0548 0.12 +0.5 551,529 - Dsui_0548 0.24 +0.2 551,585 + +1.6 551,616 + Dsui_0548 0.32 +1.4 551,943 - Dsui_0548 0.62 +0.4 552,007 - Dsui_0548 0.68 -0.1 552,127 - Dsui_0548 0.78 +0.3 552,191 - Dsui_0548 0.84 +0.1 552,306 - +0.7 552,487 + +0.4 552,551 + Dsui_0549 0.27 -2.4 552,559 - Dsui_0549 0.28 +1.2 552,591 - Dsui_0549 0.33 -0.0 552,619 + -0.7 552,702 + +1.6 552,705 - Dsui_0549 0.49 -0.5 552,717 + +0.6 552,717 + -0.2 552,730 - Dsui_0549 0.53 -0.6 552,745 - Dsui_0549 0.55 -1.2 552,768 - Dsui_0549 0.58 -1.6 552,808 + Dsui_0549 0.64 +1.3 552,862 - +0.6 552,955 + -0.7 553,058 - -0.2 553,068 - +2.1 553,114 + +0.8 553,192 + +0.5 553,219 + -1.4 553,219 + -1.5 553,227 - -1.9 553,229 + -0.6 553,231 + +0.3 553,357 + -0.2 553,363 + +0.6 553,418 + +0.1 553,481 + Dsui_0550 0.13 +0.6 553,595 - Dsui_0550 0.21 +0.3 553,598 + Dsui_0550 0.21 +0.5 553,606 - Dsui_0550 0.21 +0.3 553,606 - Dsui_0550 0.21 +0.3 553,711 + Dsui_0550 0.29 +0.2 553,723 + Dsui_0550 0.29 +0.2 553,731 - Dsui_0550 0.30 -0.5 553,804 - Dsui_0550 0.35 +1.2 553,810 + Dsui_0550 0.35 -0.4 553,861 + Dsui_0550 0.39 -0.0 553,878 + Dsui_0550 0.40 -0.3 553,886 - Dsui_0550 0.41 -0.2 554,048 - +1.2
Or see this region's nucleotide sequence