Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0447 and Dsui_0448 are separated by 18 nucleotides Dsui_0448 and Dsui_0449 are separated by 49 nucleotides Dsui_0449 and Dsui_0450 are separated by 72 nucleotides Dsui_0450 and Dsui_0451 are separated by 15 nucleotides
Dsui_0447: Dsui_0447 - putative esterase, at 454,596 to 455,159
_0447
Dsui_0448: Dsui_0448 - hypothetical protein, at 455,178 to 456,083
_0448
Dsui_0449: Dsui_0449 - undecaprenyl-diphosphatase UppP, at 456,133 to 456,957
_0449
Dsui_0450: Dsui_0450 - MAF protein, at 457,030 to 457,650
_0450
Dsui_0451: Dsui_0451 - hypothetical protein, at 457,666 to 458,148
_0451
Position (kb) 456
457 Strain fitness (log2 ratio) -1
0
1
2 at 455.161 kb on + strand at 455.161 kb on + strand at 455.169 kb on - strand at 455.283 kb on - strand, within Dsui_0448 at 455.432 kb on + strand at 455.528 kb on - strand, within Dsui_0448 at 455.620 kb on + strand, within Dsui_0448 at 455.628 kb on - strand, within Dsui_0448 at 455.628 kb on - strand, within Dsui_0448 at 455.644 kb on + strand, within Dsui_0448 at 455.747 kb on - strand, within Dsui_0448 at 455.776 kb on - strand, within Dsui_0448 at 455.905 kb on + strand, within Dsui_0448 at 455.906 kb on - strand, within Dsui_0448 at 455.918 kb on - strand, within Dsui_0448 at 455.973 kb on - strand, within Dsui_0448 at 455.973 kb on - strand, within Dsui_0448 at 456.168 kb on - strand at 457.057 kb on - strand at 457.086 kb on - strand at 457.217 kb on - strand, within Dsui_0450 at 457.263 kb on + strand, within Dsui_0450 at 457.325 kb on - strand, within Dsui_0450 at 457.445 kb on - strand, within Dsui_0450 at 457.445 kb on - strand, within Dsui_0450 at 457.454 kb on + strand, within Dsui_0450 at 457.503 kb on + strand at 457.559 kb on + strand, within Dsui_0450 at 457.645 kb on + strand at 457.712 kb on + strand at 457.720 kb on - strand, within Dsui_0451 at 457.720 kb on - strand, within Dsui_0451 at 457.739 kb on - strand, within Dsui_0451 at 457.739 kb on - strand, within Dsui_0451 at 457.758 kb on + strand at 457.758 kb on + strand, within Dsui_0451 at 457.766 kb on - strand, within Dsui_0451 at 457.766 kb on - strand, within Dsui_0451 at 457.917 kb on - strand, within Dsui_0451 at 457.933 kb on - strand, within Dsui_0451
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 455,161 + +2.0 455,161 + -0.5 455,169 - -0.0 455,283 - Dsui_0448 0.12 -0.3 455,432 + +0.6 455,528 - Dsui_0448 0.39 -0.5 455,620 + Dsui_0448 0.49 -1.1 455,628 - Dsui_0448 0.50 +0.2 455,628 - Dsui_0448 0.50 -0.0 455,644 + Dsui_0448 0.51 +0.0 455,747 - Dsui_0448 0.63 -0.5 455,776 - Dsui_0448 0.66 -0.0 455,905 + Dsui_0448 0.80 +0.5 455,906 - Dsui_0448 0.80 -0.2 455,918 - Dsui_0448 0.82 -0.2 455,973 - Dsui_0448 0.88 +0.5 455,973 - Dsui_0448 0.88 +2.2 456,168 - -0.1 457,057 - -0.2 457,086 - +0.3 457,217 - Dsui_0450 0.30 +0.5 457,263 + Dsui_0450 0.38 -0.9 457,325 - Dsui_0450 0.48 -0.1 457,445 - Dsui_0450 0.67 -0.0 457,445 - Dsui_0450 0.67 -1.0 457,454 + Dsui_0450 0.68 -0.4 457,503 + -0.2 457,559 + Dsui_0450 0.85 -0.7 457,645 + +0.4 457,712 + +0.5 457,720 - Dsui_0451 0.11 -0.5 457,720 - Dsui_0451 0.11 -0.8 457,739 - Dsui_0451 0.15 -0.0 457,739 - Dsui_0451 0.15 +0.1 457,758 + +1.6 457,758 + Dsui_0451 0.19 -0.8 457,766 - Dsui_0451 0.21 -0.1 457,766 - Dsui_0451 0.21 -0.2 457,917 - Dsui_0451 0.52 -0.4 457,933 - Dsui_0451 0.55 -0.1
Or see this region's nucleotide sequence