Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0415 and Dsui_0416 overlap by 1 nucleotides Dsui_0416 and Dsui_0417 are separated by 17 nucleotides Dsui_0417 and Dsui_0418 are separated by 34 nucleotides
Dsui_0415: Dsui_0415 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, at 416,205 to 417,185
_0415
Dsui_0416: Dsui_0416 - transcriptional regulator, at 417,185 to 417,922
_0416
Dsui_0417: Dsui_0417 - gamma-glutamyltransferase, at 417,940 to 419,529
_0417
Dsui_0418: Dsui_0418 - putative Na+-dependent transporter, at 419,564 to 420,538
_0418
Position (kb) 417
418
419
420 Strain fitness (log2 ratio) -1
0
1
2 at 416.956 kb on + strand at 416.956 kb on - strand at 417.146 kb on - strand at 417.331 kb on - strand at 417.362 kb on + strand at 417.369 kb on + strand, within Dsui_0416 at 417.428 kb on - strand at 417.645 kb on + strand at 417.744 kb on + strand at 417.865 kb on - strand at 417.913 kb on + strand at 417.999 kb on + strand at 418.002 kb on - strand at 418.087 kb on - strand at 418.558 kb on - strand, within Dsui_0417 at 418.844 kb on + strand at 418.919 kb on + strand, within Dsui_0417 at 419.045 kb on + strand at 419.123 kb on + strand, within Dsui_0417 at 419.131 kb on - strand at 419.131 kb on - strand at 419.172 kb on - strand, within Dsui_0417 at 419.324 kb on + strand, within Dsui_0417 at 419.327 kb on - strand at 419.489 kb on + strand at 419.533 kb on - strand at 419.593 kb on + strand at 419.782 kb on - strand, within Dsui_0418 at 419.824 kb on - strand at 419.868 kb on + strand, within Dsui_0418 at 419.922 kb on + strand at 419.935 kb on - strand, within Dsui_0418 at 419.966 kb on - strand, within Dsui_0418 at 419.997 kb on - strand, within Dsui_0418 at 420.004 kb on - strand, within Dsui_0418 at 420.017 kb on - strand at 420.083 kb on - strand, within Dsui_0418 at 420.098 kb on + strand, within Dsui_0418 at 420.195 kb on - strand, within Dsui_0418 at 420.195 kb on - strand at 420.222 kb on + strand at 420.270 kb on + strand, within Dsui_0418 at 420.278 kb on - strand, within Dsui_0418 at 420.283 kb on - strand, within Dsui_0418 at 420.508 kb on - strand at 420.516 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 416,956 + +1.6 416,956 - +0.6 417,146 - +1.6 417,331 - +0.9 417,362 + +1.6 417,369 + Dsui_0416 0.25 +0.2 417,428 - +0.6 417,645 + +1.6 417,744 + +2.2 417,865 - -0.1 417,913 + +0.3 417,999 + +0.6 418,002 - -1.2 418,087 - -1.7 418,558 - Dsui_0417 0.39 +1.8 418,844 + +0.3 418,919 + Dsui_0417 0.62 -0.4 419,045 + +0.6 419,123 + Dsui_0417 0.74 +0.8 419,131 - +1.6 419,131 - +1.0 419,172 - Dsui_0417 0.77 +0.3 419,324 + Dsui_0417 0.87 +0.9 419,327 - +0.3 419,489 + +0.8 419,533 - +0.4 419,593 + +0.8 419,782 - Dsui_0418 0.22 +0.8 419,824 - +0.0 419,868 + Dsui_0418 0.31 -0.7 419,922 + +1.1 419,935 - Dsui_0418 0.38 +1.1 419,966 - Dsui_0418 0.41 +0.3 419,997 - Dsui_0418 0.44 -0.0 420,004 - Dsui_0418 0.45 -0.3 420,017 - -0.2 420,083 - Dsui_0418 0.53 -0.6 420,098 + Dsui_0418 0.55 +0.6 420,195 - Dsui_0418 0.65 +0.2 420,195 - +0.6 420,222 + +1.0 420,270 + Dsui_0418 0.72 -0.3 420,278 - Dsui_0418 0.73 -0.2 420,283 - Dsui_0418 0.74 +0.5 420,508 - -0.2 420,516 + -0.4
Or see this region's nucleotide sequence