Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0258 and Dsui_0259 are separated by 10 nucleotides Dsui_0259 and Dsui_0260 overlap by 4 nucleotides Dsui_0260 and Dsui_0261 are separated by 74 nucleotides
Dsui_0258: Dsui_0258 - sulfate ABC transporter, ATP-binding protein, at 255,855 to 256,937
_0258
Dsui_0259: Dsui_0259 - sulfate ABC transporter, permease protein CysW, at 256,948 to 257,814
_0259
Dsui_0260: Dsui_0260 - sulfate ABC transporter, permease protein CysT, at 257,811 to 258,659
_0260
Dsui_0261: Dsui_0261 - sulfate/thiosulfate-binding protein, at 258,734 to 259,747
_0261
Position (kb) 256
257
258 Strain fitness (log2 ratio) -2
-1
0
1 at 256.030 kb on + strand, within Dsui_0258 at 256.093 kb on + strand, within Dsui_0258 at 256.131 kb on + strand, within Dsui_0258 at 256.178 kb on + strand, within Dsui_0258 at 256.178 kb on + strand, within Dsui_0258 at 256.435 kb on - strand, within Dsui_0258 at 256.494 kb on + strand at 256.565 kb on + strand, within Dsui_0258 at 256.570 kb on + strand, within Dsui_0258 at 256.588 kb on - strand, within Dsui_0258 at 256.667 kb on + strand, within Dsui_0258 at 256.726 kb on + strand, within Dsui_0258 at 256.844 kb on - strand at 256.971 kb on + strand at 256.991 kb on + strand at 257.125 kb on - strand, within Dsui_0259 at 257.129 kb on + strand, within Dsui_0259 at 257.137 kb on - strand, within Dsui_0259 at 257.141 kb on + strand, within Dsui_0259 at 257.301 kb on + strand, within Dsui_0259 at 257.306 kb on + strand, within Dsui_0259 at 257.362 kb on - strand, within Dsui_0259 at 257.443 kb on + strand, within Dsui_0259 at 257.478 kb on - strand, within Dsui_0259 at 257.768 kb on + strand at 257.774 kb on - strand at 257.835 kb on - strand at 257.911 kb on + strand, within Dsui_0260 at 257.946 kb on - strand, within Dsui_0260 at 257.946 kb on - strand, within Dsui_0260 at 258.056 kb on + strand, within Dsui_0260 at 258.069 kb on + strand, within Dsui_0260 at 258.190 kb on - strand, within Dsui_0260 at 258.190 kb on - strand, within Dsui_0260 at 258.245 kb on - strand, within Dsui_0260 at 258.245 kb on - strand, within Dsui_0260 at 258.257 kb on + strand, within Dsui_0260 at 258.263 kb on + strand, within Dsui_0260 at 258.328 kb on - strand, within Dsui_0260 at 258.357 kb on - strand, within Dsui_0260 at 258.604 kb on + strand at 258.685 kb on - strand at 258.744 kb on + strand at 258.757 kb on - strand at 258.786 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 256,030 + Dsui_0258 0.16 +0.4 256,093 + Dsui_0258 0.22 -1.6 256,131 + Dsui_0258 0.25 +0.3 256,178 + Dsui_0258 0.30 +0.2 256,178 + Dsui_0258 0.30 -1.0 256,435 - Dsui_0258 0.54 -1.0 256,494 + -1.1 256,565 + Dsui_0258 0.66 +0.1 256,570 + Dsui_0258 0.66 -0.6 256,588 - Dsui_0258 0.68 -0.3 256,667 + Dsui_0258 0.75 +0.2 256,726 + Dsui_0258 0.80 +0.5 256,844 - +0.2 256,971 + +0.1 256,991 + -1.2 257,125 - Dsui_0259 0.20 -0.3 257,129 + Dsui_0259 0.21 -0.2 257,137 - Dsui_0259 0.22 -0.1 257,141 + Dsui_0259 0.22 -1.0 257,301 + Dsui_0259 0.41 -1.6 257,306 + Dsui_0259 0.41 -1.6 257,362 - Dsui_0259 0.48 -1.8 257,443 + Dsui_0259 0.57 +0.1 257,478 - Dsui_0259 0.61 -1.1 257,768 + -0.1 257,774 - -0.4 257,835 - -0.8 257,911 + Dsui_0260 0.12 -0.1 257,946 - Dsui_0260 0.16 +0.2 257,946 - Dsui_0260 0.16 -1.0 258,056 + Dsui_0260 0.29 +0.0 258,069 + Dsui_0260 0.30 -1.2 258,190 - Dsui_0260 0.45 +0.3 258,190 - Dsui_0260 0.45 -0.5 258,245 - Dsui_0260 0.51 +0.1 258,245 - Dsui_0260 0.51 -0.4 258,257 + Dsui_0260 0.53 -0.6 258,263 + Dsui_0260 0.53 +0.7 258,328 - Dsui_0260 0.61 -0.5 258,357 - Dsui_0260 0.64 -0.9 258,604 + -2.5 258,685 - +0.0 258,744 + +0.5 258,757 - -0.2 258,786 - -0.1
Or see this region's nucleotide sequence