Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0220 and Dsui_0221 are separated by 142 nucleotides Dsui_0221 and Dsui_0222 are separated by 126 nucleotides Dsui_0222 and Dsui_0223 are separated by 7 nucleotides Dsui_0223 and Dsui_0224 are separated by 9 nucleotides
Dsui_0220: Dsui_0220 - 2-phosphoglycolate phosphatase, at 219,055 to 219,717
_0220
Dsui_0221: Dsui_0221 - ribulose-phosphate 3-epimerase, at 219,860 to 220,549
_0221
Dsui_0222: Dsui_0222 - uncharacterized protein affecting Mg2+/Co2+ transport, at 220,676 to 221,059
_0222
Dsui_0223: Dsui_0223 - methylase involved in ubiquinone/menaquinone biosynthesis, at 221,067 to 221,660
_0223
Dsui_0224: Dsui_0224 - transcriptional regulator, at 221,670 to 222,575
_0224
Position (kb) 220
221
222 Strain fitness (log2 ratio) -1
0
1 at 219.708 kb on + strand at 219.762 kb on - strand at 219.772 kb on + strand at 220.619 kb on + strand at 220.628 kb on + strand at 220.651 kb on - strand at 220.660 kb on + strand at 220.667 kb on + strand at 220.667 kb on + strand at 220.667 kb on + strand at 220.668 kb on - strand at 220.731 kb on - strand, within Dsui_0222 at 220.782 kb on - strand, within Dsui_0222 at 220.865 kb on + strand, within Dsui_0222 at 220.977 kb on + strand, within Dsui_0222 at 221.013 kb on - strand, within Dsui_0222 at 221.083 kb on + strand at 221.091 kb on - strand at 221.096 kb on - strand at 221.165 kb on + strand, within Dsui_0223 at 221.368 kb on + strand, within Dsui_0223 at 221.384 kb on + strand, within Dsui_0223 at 221.411 kb on + strand, within Dsui_0223 at 221.431 kb on + strand, within Dsui_0223 at 221.499 kb on + strand, within Dsui_0223 at 221.520 kb on + strand, within Dsui_0223 at 221.589 kb on - strand, within Dsui_0223 at 221.732 kb on - strand at 221.804 kb on + strand, within Dsui_0224 at 221.863 kb on - strand, within Dsui_0224 at 221.990 kb on - strand, within Dsui_0224 at 222.005 kb on - strand, within Dsui_0224
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 219,708 + +1.7 219,762 - +0.6 219,772 + -0.0 220,619 + +0.3 220,628 + +1.3 220,651 - +0.2 220,660 + +0.1 220,667 + -0.9 220,667 + -0.3 220,667 + +0.3 220,668 - +0.6 220,731 - Dsui_0222 0.14 +0.1 220,782 - Dsui_0222 0.28 +0.1 220,865 + Dsui_0222 0.49 -1.0 220,977 + Dsui_0222 0.78 +0.1 221,013 - Dsui_0222 0.88 -0.2 221,083 + -0.6 221,091 - -0.6 221,096 - +0.4 221,165 + Dsui_0223 0.16 -0.9 221,368 + Dsui_0223 0.51 +0.4 221,384 + Dsui_0223 0.53 -0.2 221,411 + Dsui_0223 0.58 +0.2 221,431 + Dsui_0223 0.61 +0.3 221,499 + Dsui_0223 0.73 +0.3 221,520 + Dsui_0223 0.76 +0.1 221,589 - Dsui_0223 0.88 -0.1 221,732 - +0.1 221,804 + Dsui_0224 0.15 +0.2 221,863 - Dsui_0224 0.21 -0.3 221,990 - Dsui_0224 0.35 +0.2 222,005 - Dsui_0224 0.37 +0.4
Or see this region's nucleotide sequence