Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0189 and Dsui_0190 overlap by 4 nucleotides Dsui_0190 and Dsui_0191 overlap by 23 nucleotides Dsui_0191 and Dsui_0192 are separated by 183 nucleotides Dsui_0192 and Dsui_0193 overlap by 20 nucleotides
Dsui_0189: Dsui_0189 - holliday junction resolvase, at 189,998 to 190,438
_0189
Dsui_0190: Dsui_0190 - hypothetical protein, at 190,435 to 190,635
_0190
Dsui_0191: Dsui_0191 - hypothetical protein, at 190,613 to 191,242
_0191
Dsui_0192: Dsui_0192 - hypothetical protein, at 191,426 to 191,869
_0192
Dsui_0193: Dsui_0193 - putative phage protein, putative large terminase, at 191,850 to 193,328
_0193
Position (kb) 191
192 Strain fitness (log2 ratio) -1
0
1
2 at 190.432 kb on + strand at 190.546 kb on + strand, within Dsui_0190 at 190.651 kb on + strand at 190.668 kb on + strand at 190.697 kb on + strand, within Dsui_0191 at 190.705 kb on - strand, within Dsui_0191 at 190.792 kb on - strand, within Dsui_0191 at 190.797 kb on - strand, within Dsui_0191 at 190.806 kb on - strand, within Dsui_0191 at 190.882 kb on - strand at 191.026 kb on - strand, within Dsui_0191 at 191.136 kb on - strand, within Dsui_0191 at 191.285 kb on - strand at 191.540 kb on + strand, within Dsui_0192 at 191.575 kb on - strand, within Dsui_0192 at 191.675 kb on + strand, within Dsui_0192 at 191.675 kb on + strand, within Dsui_0192 at 191.750 kb on - strand at 191.796 kb on + strand at 191.945 kb on + strand at 191.992 kb on - strand at 192.011 kb on + strand, within Dsui_0193 at 192.011 kb on + strand, within Dsui_0193 at 192.019 kb on - strand, within Dsui_0193 at 192.023 kb on + strand, within Dsui_0193 at 192.058 kb on + strand, within Dsui_0193 at 192.374 kb on + strand, within Dsui_0193 at 192.543 kb on + strand, within Dsui_0193 at 192.611 kb on + strand, within Dsui_0193 at 192.611 kb on + strand, within Dsui_0193 at 192.626 kb on + strand, within Dsui_0193 at 192.812 kb on + strand, within Dsui_0193 at 192.834 kb on - strand, within Dsui_0193 at 192.837 kb on + strand, within Dsui_0193
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 190,432 + +0.5 190,546 + Dsui_0190 0.55 +0.2 190,651 + -0.8 190,668 + +0.6 190,697 + Dsui_0191 0.13 -0.5 190,705 - Dsui_0191 0.15 +0.2 190,792 - Dsui_0191 0.28 -0.6 190,797 - Dsui_0191 0.29 -0.3 190,806 - Dsui_0191 0.31 +0.1 190,882 - +0.1 191,026 - Dsui_0191 0.66 -0.5 191,136 - Dsui_0191 0.83 +0.7 191,285 - -0.1 191,540 + Dsui_0192 0.26 -0.9 191,575 - Dsui_0192 0.34 -0.3 191,675 + Dsui_0192 0.56 -1.3 191,675 + Dsui_0192 0.56 -0.7 191,750 - +2.5 191,796 + +0.7 191,945 + -0.4 191,992 - +0.5 192,011 + Dsui_0193 0.11 +0.8 192,011 + Dsui_0193 0.11 +1.2 192,019 - Dsui_0193 0.11 -0.0 192,023 + Dsui_0193 0.12 +0.6 192,058 + Dsui_0193 0.14 +1.3 192,374 + Dsui_0193 0.35 -0.1 192,543 + Dsui_0193 0.47 -1.5 192,611 + Dsui_0193 0.51 +0.4 192,611 + Dsui_0193 0.51 +0.4 192,626 + Dsui_0193 0.52 -0.9 192,812 + Dsui_0193 0.65 +0.4 192,834 - Dsui_0193 0.67 +0.2 192,837 + Dsui_0193 0.67 -0.5
Or see this region's nucleotide sequence