Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0096 and Dsui_0097 are separated by 119 nucleotides Dsui_0097 and Dsui_0098 are separated by 88 nucleotides Dsui_0098 and Dsui_0099 are separated by 3 nucleotides Dsui_0099 and Dsui_0100 overlap by 4 nucleotides Dsui_0100 and Dsui_0101 are separated by 166 nucleotides
Dsui_0096: Dsui_0096 - methyl-accepting chemotaxis protein, at 95,373 to 97,190
_0096
Dsui_0097: Dsui_0097 - putative metal-binding protein, at 97,310 to 97,750
_0097
Dsui_0098: Dsui_0098 - Uncharacterized protein family UPF0057, at 97,839 to 98,033
_0098
Dsui_0099: Dsui_0099 - putative periplasmic or secreted lipoprotein, at 98,037 to 98,696
_0099
Dsui_0100: Dsui_0100 - phosphoheptose isomerase, at 98,693 to 99,286
_0100
Dsui_0101: Dsui_0101 - exonuclease, DNA polymerase III, epsilon subunit family, at 99,453 to 100,919
_0101
Position (kb)
98
99 Strain fitness (log2 ratio)
-1
0
1
2 at 97.057 kb on - strand at 97.057 kb on - strand at 97.072 kb on + strand at 97.249 kb on + strand at 97.381 kb on - strand, within Dsui_0097 at 97.442 kb on - strand at 97.444 kb on + strand, within Dsui_0097 at 97.473 kb on + strand, within Dsui_0097 at 97.473 kb on + strand, within Dsui_0097 at 97.478 kb on + strand, within Dsui_0097 at 97.535 kb on - strand, within Dsui_0097 at 97.535 kb on - strand, within Dsui_0097 at 97.535 kb on - strand, within Dsui_0097 at 97.540 kb on - strand, within Dsui_0097 at 97.576 kb on - strand, within Dsui_0097 at 97.618 kb on + strand, within Dsui_0097 at 97.626 kb on - strand, within Dsui_0097 at 97.687 kb on - strand at 97.709 kb on - strand at 97.739 kb on + strand at 97.744 kb on + strand at 97.744 kb on + strand at 97.744 kb on + strand at 97.744 kb on + strand at 97.752 kb on - strand at 98.004 kb on + strand, within Dsui_0098 at 98.066 kb on + strand at 98.066 kb on + strand at 98.098 kb on + strand at 98.106 kb on - strand, within Dsui_0099 at 98.158 kb on - strand, within Dsui_0099 at 98.213 kb on + strand, within Dsui_0099 at 98.243 kb on - strand, within Dsui_0099 at 98.407 kb on + strand, within Dsui_0099 at 98.407 kb on + strand, within Dsui_0099 at 98.530 kb on - strand, within Dsui_0099 at 98.710 kb on + strand at 99.298 kb on - strand at 99.339 kb on - strand at 99.423 kb on - strand at 99.423 kb on - strand at 99.423 kb on - strand at 99.423 kb on - strand at 99.431 kb on + strand at 99.454 kb on - strand at 99.504 kb on + strand at 99.512 kb on - strand at 99.512 kb on - strand at 99.589 kb on - strand at 99.594 kb on + strand at 99.651 kb on - strand, within Dsui_0101
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 97,057 - +0.8 97,057 - -0.3 97,072 + +0.4 97,249 + +0.1 97,381 - Dsui_0097 0.16 +0.3 97,442 - +0.7 97,444 + Dsui_0097 0.30 +0.2 97,473 + Dsui_0097 0.37 -0.5 97,473 + Dsui_0097 0.37 +0.3 97,478 + Dsui_0097 0.38 -0.4 97,535 - Dsui_0097 0.51 -0.2 97,535 - Dsui_0097 0.51 +0.1 97,535 - Dsui_0097 0.51 -0.0 97,540 - Dsui_0097 0.52 +0.3 97,576 - Dsui_0097 0.60 +0.6 97,618 + Dsui_0097 0.70 -0.1 97,626 - Dsui_0097 0.72 -0.5 97,687 - -0.6 97,709 - -0.1 97,739 + +0.3 97,744 + -0.1 97,744 + +0.0 97,744 + -0.8 97,744 + +0.5 97,752 - +0.0 98,004 + Dsui_0098 0.85 +0.1 98,066 + +2.4 98,066 + -0.7 98,098 + +0.5 98,106 - Dsui_0099 0.10 +0.2 98,158 - Dsui_0099 0.18 -1.3 98,213 + Dsui_0099 0.27 -1.3 98,243 - Dsui_0099 0.31 -0.6 98,407 + Dsui_0099 0.56 -1.0 98,407 + Dsui_0099 0.56 +0.9 98,530 - Dsui_0099 0.75 -0.4 98,710 + -0.6 99,298 - +0.5 99,339 - -0.5 99,423 - -0.1 99,423 - -0.5 99,423 - -0.8 99,423 - -1.5 99,431 + +0.5 99,454 - -0.3 99,504 + -0.1 99,512 - +0.6 99,512 - +0.4 99,589 - -0.4 99,594 + -0.2 99,651 - Dsui_0101 0.13 -0.7
Or see this region's nucleotide sequence