Experiment: rich media with hydrogen peroxide 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0041 and Dsui_0042 are separated by 134 nucleotides Dsui_0042 and Dsui_0043 are separated by 135 nucleotides Dsui_0043 and Dsui_0044 are separated by 25 nucleotides
Dsui_0041: Dsui_0041 - hypothetical protein, at 38,068 to 39,075
_0041
Dsui_0042: Dsui_0042 - Protein of unknown function (DUF2892), at 39,210 to 39,401
_0042
Dsui_0043: Dsui_0043 - cAMP-binding protein, at 39,537 to 40,205
_0043
Dsui_0044: Dsui_0044 - exodeoxyribonuclease III, at 40,231 to 41,004
_0044
Position (kb) 39
40 Strain fitness (log2 ratio) -2
-1
0
1
2 at 38.229 kb on - strand at 38.347 kb on - strand, within Dsui_0041 at 38.452 kb on - strand at 38.459 kb on - strand at 38.466 kb on + strand, within Dsui_0041 at 38.510 kb on + strand, within Dsui_0041 at 38.518 kb on - strand, within Dsui_0041 at 38.640 kb on - strand, within Dsui_0041 at 38.686 kb on + strand, within Dsui_0041 at 38.692 kb on + strand, within Dsui_0041 at 38.819 kb on + strand, within Dsui_0041 at 38.871 kb on - strand at 38.895 kb on + strand, within Dsui_0041 at 38.895 kb on + strand, within Dsui_0041 at 38.903 kb on - strand, within Dsui_0041 at 38.950 kb on + strand, within Dsui_0041 at 39.023 kb on - strand at 39.026 kb on + strand at 39.198 kb on + strand at 39.208 kb on + strand at 39.249 kb on + strand at 39.321 kb on + strand, within Dsui_0042 at 39.352 kb on - strand, within Dsui_0042 at 39.438 kb on - strand at 39.463 kb on - strand at 39.628 kb on + strand at 39.639 kb on - strand, within Dsui_0043 at 39.666 kb on + strand at 39.712 kb on - strand, within Dsui_0043 at 39.914 kb on + strand, within Dsui_0043 at 39.933 kb on + strand, within Dsui_0043 at 39.933 kb on + strand, within Dsui_0043 at 39.941 kb on - strand, within Dsui_0043 at 39.982 kb on + strand at 39.990 kb on - strand, within Dsui_0043 at 40.025 kb on + strand at 40.044 kb on - strand, within Dsui_0043 at 40.093 kb on - strand, within Dsui_0043 at 40.120 kb on + strand, within Dsui_0043 at 40.207 kb on - strand at 40.222 kb on + strand at 40.259 kb on + strand at 40.368 kb on + strand, within Dsui_0044 at 40.376 kb on - strand, within Dsui_0044
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with hydrogen peroxide 5 mM remove 38,229 - +0.1 38,347 - Dsui_0041 0.28 -1.5 38,452 - +1.7 38,459 - +0.7 38,466 + Dsui_0041 0.39 -0.9 38,510 + Dsui_0041 0.44 +0.1 38,518 - Dsui_0041 0.45 -0.1 38,640 - Dsui_0041 0.57 +0.9 38,686 + Dsui_0041 0.61 +0.3 38,692 + Dsui_0041 0.62 -0.2 38,819 + Dsui_0041 0.75 -0.8 38,871 - +2.3 38,895 + Dsui_0041 0.82 +0.8 38,895 + Dsui_0041 0.82 -0.8 38,903 - Dsui_0041 0.83 +0.9 38,950 + Dsui_0041 0.88 +0.0 39,023 - -1.5 39,026 + +1.7 39,198 + +0.4 39,208 + -0.5 39,249 + -0.1 39,321 + Dsui_0042 0.58 +1.2 39,352 - Dsui_0042 0.74 -0.1 39,438 - -0.4 39,463 - +0.3 39,628 + -0.3 39,639 - Dsui_0043 0.15 +0.2 39,666 + +0.9 39,712 - Dsui_0043 0.26 +0.0 39,914 + Dsui_0043 0.56 -0.7 39,933 + Dsui_0043 0.59 +0.3 39,933 + Dsui_0043 0.59 +0.3 39,941 - Dsui_0043 0.60 +0.1 39,982 + -0.3 39,990 - Dsui_0043 0.68 +0.2 40,025 + +2.7 40,044 - Dsui_0043 0.76 +0.7 40,093 - Dsui_0043 0.83 -1.0 40,120 + Dsui_0043 0.87 +0.3 40,207 - +1.2 40,222 + +0.3 40,259 + -2.0 40,368 + Dsui_0044 0.18 -1.1 40,376 - Dsui_0044 0.19 -0.3
Or see this region's nucleotide sequence