Strain Fitness in Shewanella loihica PV-4 around Shew_3701

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
4,404,334	-				+0.2
4,404,406	+		Shew_3700	0.16	-0.1
4,404,429	+		Shew_3700	0.18	-0.4
4,404,623	+		Shew_3700	0.36	-1.1
4,404,965	+		Shew_3700	0.67	+0.1
4,404,965	+		Shew_3700	0.67	-0.2
4,404,986	-		Shew_3700	0.69	-0.6
4,404,986	-		Shew_3700	0.69	+0.1
4,405,074	-		Shew_3700	0.77	-0.0
4,405,087	+		Shew_3700	0.78	-1.8
4,405,095	-		Shew_3700	0.79	-0.5
4,405,190	+		Shew_3700	0.87	+0.1
4,405,198	-		Shew_3700	0.88	+0.6
4,405,198	-		Shew_3700	0.88	+0.6
4,405,839	-		Shew_3701	0.48	-1.2
4,405,923	-		Shew_3701	0.56	-1.5
4,405,925	-		Shew_3701	0.56	-0.5
4,406,024	-		Shew_3701	0.66	-0.2
4,406,233	-		Shew_3701	0.85	-1.2
4,406,277	-		Shew_3701	0.89	-2.4
4,406,348	+				-0.7
4,406,563	-				-0.6
4,406,743	-		Shew_3702	0.21	+1.5
4,406,945	+		Shew_3702	0.40	+1.5
4,407,026	+		Shew_3702	0.48	-3.0
4,407,146	+		Shew_3702	0.59	-0.4
4,407,267	-		Shew_3702	0.70	-1.8