Strain Fitness in Shewanella loihica PV-4 around Shew_3696

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
4,398,850	-		Shew_3694	0.52	+2.5
4,398,869	-		Shew_3694	0.54	+1.1
4,399,023	+		Shew_3694	0.70	+0.0
4,399,066	-		Shew_3694	0.74	-1.3
4,399,165	+		Shew_3694	0.85	+0.0
4,399,178	+		Shew_3694	0.86	-0.4
4,399,208	-		Shew_3694	0.89	+0.0
4,399,210	+		Shew_3694	0.90	+1.2
4,399,210	+		Shew_3694	0.90	-0.8
4,399,210	+		Shew_3694	0.90	-0.5
4,399,218	-				-0.2
4,399,218	-				-0.3
4,399,218	-				-0.0
4,399,223	+				-0.1
4,399,685	-		Shew_3695	0.80	-0.8
4,399,838	+				-1.6
4,400,048	-		Shew_3696	0.28	-1.7
4,400,508	+		Shew_3696	0.74	-2.0
4,400,516	-		Shew_3696	0.74	-1.4
4,400,529	-		Shew_3696	0.76	-1.3
4,400,658	-		Shew_3696	0.88	-0.6
4,400,749	-				-0.3
4,400,823	-				-0.8
4,400,949	-				+0.1
4,401,490	+		Shew_3697	0.29	-1.8
4,401,497	+		Shew_3697	0.30	-0.2
4,401,498	-		Shew_3697	0.30	-0.6
4,401,502	+		Shew_3697	0.30	-2.0
4,401,737	-		Shew_3697	0.50	-4.4
4,401,772	-		Shew_3697	0.53	-1.7