Strain Fitness in Shewanella loihica PV-4 around Shew_1544

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
1,772,000	-		Shew_1543	0.17	-0.2
1,772,251	+		Shew_1543	0.41	+1.3
1,772,251	+		Shew_1543	0.41	+0.6
1,772,259	-		Shew_1543	0.42	+0.1
1,772,259	-		Shew_1543	0.42	+0.1
1,772,439	+		Shew_1543	0.59	-0.2
1,772,573	-		Shew_1543	0.72	+1.6
1,772,588	-		Shew_1543	0.73	-0.7
1,772,628	+		Shew_1543	0.77	-0.1
1,772,735	-		Shew_1543	0.87	-0.4
1,773,049	+		Shew_1544	0.19	-0.8
1,773,066	+		Shew_1544	0.22	-2.2
1,773,096	+		Shew_1544	0.27	-0.3
1,773,686	+				+0.1
1,773,740	-				-0.2
1,774,197	-		Shew_1545	0.70	-0.3
1,774,574	+				+0.2
1,774,574	+				+0.2