Strain Fitness in Shewanella loihica PV-4 around Shew_1159

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
1,332,387	-		Shew_1158	0.53	+0.4
1,332,472	+		Shew_1158	0.59	-1.8
1,332,605	-		Shew_1158	0.67	+0.4
1,332,764	+		Shew_1158	0.78	+0.2
1,332,827	+		Shew_1158	0.82	-0.2
1,332,879	+		Shew_1158	0.86	+0.0
1,332,887	-		Shew_1158	0.86	-0.4
1,332,887	-		Shew_1158	0.86	-0.9
1,332,887	-		Shew_1158	0.86	-0.1
1,333,017	-				+0.3
1,333,582	+		Shew_1159	0.58	+0.2
1,333,585	-		Shew_1159	0.59	-1.2
1,333,622	-		Shew_1159	0.69	-1.1
1,333,727	-				+0.9
1,333,793	-				+3.9
1,333,796	+				-1.2
1,333,806	+				+0.0
1,333,814	-				-0.1
1,334,283	+				-0.2
1,334,653	-		Shew_1161	0.28	+0.0