Strain Fitness in Shewanella loihica PV-4 around Shew_1136

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
1,309,701	-				-1.2
1,309,739	+				-0.1
1,309,747	-				-0.3
1,309,850	-		Shew_1134	0.40	+0.1
1,309,918	+		Shew_1134	0.64	-0.3
1,309,918	+		Shew_1134	0.64	+0.4
1,309,918	+		Shew_1134	0.64	+1.5
1,309,970	-		Shew_1134	0.81	-0.3
1,310,666	-				+0.4
1,310,700	-				-0.8
1,310,849	+		Shew_1136	0.26	+0.2
1,311,110	-		Shew_1136	0.58	-0.3
1,311,303	+		Shew_1136	0.82	+0.2
1,311,378	+				+0.5
1,311,378	+				-1.2
1,311,378	+				-0.1
1,311,386	-				-0.3
1,311,518	-				-1.0
1,311,518	-				+0.8
1,311,530	+				+0.3
1,311,636	-		Shew_1137	0.15	-1.0
1,311,764	-		Shew_1137	0.33	+0.1
1,312,306	-				-1.2