Strain Fitness in Shewanella loihica PV-4 around Shew_0193

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
198,333	+		Shew_0192	0.59	+0.6
198,426	-		Shew_0192	0.66	+0.3
198,508	-		Shew_0192	0.73	+1.3
198,552	+		Shew_0192	0.76	-0.4
198,555	-		Shew_0192	0.76	-0.5
198,560	-		Shew_0192	0.77	+0.2
198,808	-				+0.5
198,813	-				-0.2
198,818	-				+1.0
198,957	-				+1.9
198,991	-				+0.2
199,039	+				-0.3
199,061	+				+1.3
199,120	-				+0.6
199,177	+				+2.0
200,631	-		Shew_0193	0.69	-0.9
200,692	-		Shew_0193	0.72	-0.9
200,882	+		Shew_0193	0.82	-1.5
200,939	+		Shew_0193	0.85	-0.8
200,959	-		Shew_0193	0.86	-0.5
201,178	+				+0.8
201,399	+		Shew_0194	0.25	-0.1
201,790	+				+0.7
201,790	+				+0.0
201,790	+				+0.5
201,790	+				+0.4
201,959	+		Shew_0195	0.30	-0.2