Strain Fitness in Shewanella loihica PV-4 around Shew_0096

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
106,909	+		Shew_0094	0.85	-0.1
106,975	-				-1.1
107,052	-				+0.1
107,096	-				-0.3
107,101	-				+0.2
107,121	+				-0.2
107,147	+				+1.0
107,215	-				+0.1
107,351	-		Shew_0095	0.47	+0.0
107,351	+		Shew_0095	0.47	+0.2
107,429	+		Shew_0095	0.69	-0.1
107,429	+		Shew_0095	0.69	-0.6
107,429	+		Shew_0095	0.69	-0.2
107,437	-		Shew_0095	0.71	-1.2
107,437	-		Shew_0095	0.71	+0.1
107,437	-		Shew_0095	0.71	-4.1
107,437	-		Shew_0095	0.71	-0.3
107,437	-		Shew_0095	0.71	+0.1
107,513	+				-0.4
107,731	-				-1.4
107,775	-		Shew_0096	0.15	-3.8
107,789	+		Shew_0096	0.18	-0.3
107,797	-		Shew_0096	0.20	-2.4
107,797	-		Shew_0096	0.20	-2.2
107,811	-		Shew_0096	0.22	-2.5
107,818	-		Shew_0096	0.23	-2.5
107,837	+		Shew_0096	0.27	+0.5
108,186	-				-2.9
108,213	+				-0.1
108,339	-		Shew_0097	0.16	-4.4
108,345	-		Shew_0097	0.17	-2.2
108,469	+		Shew_0097	0.35	-2.7
108,553	-		Shew_0097	0.47	-2.4
108,927	-				-3.1
109,074	+				-3.1