Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3736 and Dshi_3737 overlap by 4 nucleotides Dshi_3737 and Dshi_3738 are separated by 311 nucleotides
Dshi_3736: Dshi_3736 - Integrase catalytic region (RefSeq), at 142,349 to 143,254
_3736
Dshi_3737: Dshi_3737 - transposase IS3/IS911 family protein (RefSeq), at 143,251 to 143,583
_3737
Dshi_3738: Dshi_3738 - transposase IS116/IS110/IS902 family protein (RefSeq), at 143,895 to 145,256
_3738
Position (kb)
143
144 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 142.252 kb on + strand at 142.252 kb on + strand at 142.252 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.260 kb on - strand at 142.262 kb on - strand at 142.262 kb on - strand at 142.262 kb on - strand at 142.262 kb on - strand at 142.270 kb on - strand at 142.297 kb on - strand at 142.314 kb on - strand at 142.336 kb on - strand at 142.341 kb on - strand at 142.342 kb on - strand at 142.343 kb on - strand at 143.639 kb on + strand at 143.646 kb on - strand at 143.646 kb on - strand at 143.687 kb on + strand at 143.689 kb on + strand at 143.701 kb on + strand at 143.702 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.714 kb on + strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.722 kb on - strand at 143.789 kb on - strand at 143.799 kb on + strand at 143.800 kb on + strand at 143.808 kb on - strand at 143.808 kb on - strand at 143.860 kb on + strand at 143.861 kb on + strand at 143.861 kb on + strand at 143.863 kb on - strand at 143.876 kb on - strand at 143.879 kb on + strand at 143.884 kb on + strand at 143.884 kb on + strand at 143.903 kb on + strand at 143.903 kb on + strand at 143.903 kb on + strand at 143.903 kb on + strand at 143.911 kb on - strand at 143.936 kb on + strand at 143.941 kb on + strand at 143.941 kb on + strand at 143.941 kb on + strand at 143.949 kb on - strand at 143.949 kb on - strand at 143.949 kb on - strand at 143.971 kb on + strand at 143.986 kb on - strand at 143.988 kb on + strand at 143.996 kb on + strand at 143.996 kb on - strand at 144.004 kb on - strand at 144.067 kb on + strand, within Dshi_3738 at 144.075 kb on - strand, within Dshi_3738 at 144.075 kb on - strand, within Dshi_3738 at 144.093 kb on - strand, within Dshi_3738 at 144.098 kb on - strand, within Dshi_3738 at 144.121 kb on + strand, within Dshi_3738 at 144.162 kb on - strand, within Dshi_3738 at 144.168 kb on - strand, within Dshi_3738 at 144.221 kb on - strand, within Dshi_3738 at 144.226 kb on + strand, within Dshi_3738 at 144.231 kb on - strand, within Dshi_3738 at 144.236 kb on - strand, within Dshi_3738 at 144.255 kb on + strand, within Dshi_3738 at 144.263 kb on - strand, within Dshi_3738 at 144.263 kb on - strand, within Dshi_3738 at 144.263 kb on - strand, within Dshi_3738 at 144.268 kb on - strand, within Dshi_3738 at 144.332 kb on + strand, within Dshi_3738 at 144.424 kb on - strand, within Dshi_3738 at 144.442 kb on - strand, within Dshi_3738 at 144.472 kb on + strand, within Dshi_3738 at 144.472 kb on + strand, within Dshi_3738 at 144.480 kb on - strand, within Dshi_3738 at 144.521 kb on - strand, within Dshi_3738 at 144.527 kb on + strand, within Dshi_3738 at 144.527 kb on + strand, within Dshi_3738 at 144.535 kb on - strand, within Dshi_3738 at 144.535 kb on - strand, within Dshi_3738 at 144.542 kb on + strand, within Dshi_3738 at 144.550 kb on - strand, within Dshi_3738 at 144.561 kb on + strand, within Dshi_3738
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 142,252 + -1.2 142,252 + -0.8 142,252 + -0.5 142,254 + +3.1 142,254 + -1.8 142,254 + +0.5 142,254 + -0.4 142,254 + +0.2 142,254 + -0.8 142,254 + -1.3 142,254 + +0.1 142,260 - -1.0 142,262 - +3.9 142,262 - -1.6 142,262 - +3.7 142,262 - -0.9 142,270 - +2.9 142,297 - +1.1 142,314 - +0.0 142,336 - -0.1 142,341 - -1.1 142,342 - -0.4 142,343 - -0.7 143,639 + +1.8 143,646 - -1.1 143,646 - -0.5 143,687 + -0.0 143,689 + +0.2 143,701 + +0.2 143,702 + -0.2 143,712 + +1.4 143,712 + +1.2 143,712 + -0.2 143,712 + -1.7 143,712 + -0.4 143,712 + -0.3 143,712 + -1.2 143,712 + -0.4 143,712 + -1.1 143,712 + -0.2 143,712 + -0.8 143,712 + -2.8 143,712 + +0.3 143,712 + -0.4 143,712 + -0.6 143,712 + -0.7 143,712 + +0.1 143,712 + -0.9 143,712 + -0.0 143,712 + -0.9 143,714 + -1.4 143,720 - -0.6 143,720 - -0.7 143,720 - -0.5 143,720 - +0.8 143,720 - -0.4 143,720 - -0.8 143,720 - +1.1 143,720 - +1.4 143,720 - +0.6 143,720 - -0.5 143,720 - -0.3 143,722 - -0.6 143,789 - +0.3 143,799 + -2.0 143,800 + -0.6 143,808 - -0.1 143,808 - -0.7 143,860 + -0.6 143,861 + -1.3 143,861 + -1.0 143,863 - -2.9 143,876 - -0.7 143,879 + -0.5 143,884 + -0.2 143,884 + +1.6 143,903 + -0.8 143,903 + +1.5 143,903 + -1.1 143,903 + +0.1 143,911 - -1.5 143,936 + -0.7 143,941 + +0.8 143,941 + +0.0 143,941 + -0.7 143,949 - -1.1 143,949 - -0.6 143,949 - -0.8 143,971 + +1.0 143,986 - -0.2 143,988 + +0.4 143,996 + -0.4 143,996 - +0.0 144,004 - -1.8 144,067 + Dshi_3738 0.13 +0.1 144,075 - Dshi_3738 0.13 -0.0 144,075 - Dshi_3738 0.13 +2.2 144,093 - Dshi_3738 0.15 -1.9 144,098 - Dshi_3738 0.15 +0.9 144,121 + Dshi_3738 0.17 +0.1 144,162 - Dshi_3738 0.20 -1.5 144,168 - Dshi_3738 0.20 -0.4 144,221 - Dshi_3738 0.24 -0.1 144,226 + Dshi_3738 0.24 +1.1 144,231 - Dshi_3738 0.25 +1.4 144,236 - Dshi_3738 0.25 +0.0 144,255 + Dshi_3738 0.26 -0.5 144,263 - Dshi_3738 0.27 +0.4 144,263 - Dshi_3738 0.27 -0.4 144,263 - Dshi_3738 0.27 -0.3 144,268 - Dshi_3738 0.27 -0.5 144,332 + Dshi_3738 0.32 -1.0 144,424 - Dshi_3738 0.39 -1.5 144,442 - Dshi_3738 0.40 -0.9 144,472 + Dshi_3738 0.42 +0.5 144,472 + Dshi_3738 0.42 -0.2 144,480 - Dshi_3738 0.43 -1.0 144,521 - Dshi_3738 0.46 +2.3 144,527 + Dshi_3738 0.46 +0.6 144,527 + Dshi_3738 0.46 +0.6 144,535 - Dshi_3738 0.47 +0.3 144,535 - Dshi_3738 0.47 -0.3 144,542 + Dshi_3738 0.48 -1.0 144,550 - Dshi_3738 0.48 +2.4 144,561 + Dshi_3738 0.49 +0.9
Or see this region's nucleotide sequence