Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3703

Experiment: m.b. copper (II) chloride 0.64 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. copper (II) chloride 0.64 mM
110,012	-		Dshi_3702	0.23	-0.3
110,040	-		Dshi_3702	0.27	-0.8
110,068	+		Dshi_3702	0.30	+3.4
110,068	+		Dshi_3702	0.30	-0.8
110,071	+		Dshi_3702	0.30	-2.0
110,071	+		Dshi_3702	0.30	-0.5
110,071	+		Dshi_3702	0.30	-1.0
110,076	+		Dshi_3702	0.31	-0.1
110,076	-		Dshi_3702	0.31	-0.2
110,079	-		Dshi_3702	0.31	+0.3
110,081	+		Dshi_3702	0.31	-0.8
110,081	+		Dshi_3702	0.31	+3.1
110,081	+		Dshi_3702	0.31	-1.5
110,081	+		Dshi_3702	0.31	-1.3
110,084	-		Dshi_3702	0.32	+1.0
110,084	-		Dshi_3702	0.32	-0.4
110,084	-		Dshi_3702	0.32	-0.3
110,084	-		Dshi_3702	0.32	+0.0
110,084	-		Dshi_3702	0.32	-0.5
110,084	-		Dshi_3702	0.32	-1.0
110,084	-		Dshi_3702	0.32	-1.6
110,084	-		Dshi_3702	0.32	+0.4
110,089	-		Dshi_3702	0.32	+0.3
110,089	-		Dshi_3702	0.32	-1.1
110,089	-		Dshi_3702	0.32	+0.3
110,101	+		Dshi_3702	0.34	-1.2
110,101	+		Dshi_3702	0.34	+1.7
110,101	+		Dshi_3702	0.34	-0.1
110,109	-		Dshi_3702	0.35	+0.2
110,109	-		Dshi_3702	0.35	+1.5
110,120	+		Dshi_3702	0.36	+0.8
110,120	+		Dshi_3702	0.36	-1.0
110,128	-		Dshi_3702	0.37	-0.5
110,128	-		Dshi_3702	0.37	-0.4
110,128	-		Dshi_3702	0.37	-1.1
110,155	+		Dshi_3702	0.40	+1.1
110,157	-		Dshi_3702	0.40	-0.1
110,158	+		Dshi_3702	0.41	-1.0
110,158	+		Dshi_3702	0.41	+0.3
110,158	+		Dshi_3702	0.41	+0.1
110,158	+		Dshi_3702	0.41	-0.3
110,158	+		Dshi_3702	0.41	+0.9
110,158	+		Dshi_3702	0.41	-1.3
110,158	+		Dshi_3702	0.41	-0.3
110,158	+		Dshi_3702	0.41	-0.0
110,166	-		Dshi_3702	0.42	+0.3
110,166	-		Dshi_3702	0.42	+0.2
110,166	-		Dshi_3702	0.42	-0.4
110,188	+		Dshi_3702	0.44	+0.3
110,188	+		Dshi_3702	0.44	+2.1
110,188	+		Dshi_3702	0.44	-1.1
110,188	+		Dshi_3702	0.44	+0.2
110,188	+		Dshi_3702	0.44	-0.9
110,196	-		Dshi_3702	0.45	-1.4
110,196	-		Dshi_3702	0.45	+0.7
110,196	-		Dshi_3702	0.45	-1.5
110,197	+		Dshi_3702	0.45	+2.6
110,197	+		Dshi_3702	0.45	-0.2
110,201	+		Dshi_3702	0.46	-0.9
110,201	+		Dshi_3702	0.46	+0.7
110,201	+		Dshi_3702	0.46	-0.6
110,201	+		Dshi_3702	0.46	-0.0
110,201	+		Dshi_3702	0.46	-0.6
110,201	+		Dshi_3702	0.46	-0.3
110,201	+		Dshi_3702	0.46	-1.0
110,201	+		Dshi_3702	0.46	-0.6
110,201	+		Dshi_3702	0.46	+0.7
110,201	+		Dshi_3702	0.46	+0.3
110,201	+		Dshi_3702	0.46	+1.0
110,201	+		Dshi_3702	0.46	-0.4
110,201	+		Dshi_3702	0.46	+0.5
110,201	+		Dshi_3702	0.46	-0.3
110,202	+		Dshi_3702	0.46	-0.3
110,202	+		Dshi_3702	0.46	+0.6
110,202	+		Dshi_3702	0.46	-0.7
110,202	+		Dshi_3702	0.46	-1.0
110,204	-		Dshi_3702	0.46	-0.2
110,205	-		Dshi_3702	0.46	-1.0
110,205	-		Dshi_3702	0.46	+0.9
110,209	-		Dshi_3702	0.47	-0.0
110,209	-		Dshi_3702	0.47	+0.3
110,209	-		Dshi_3702	0.47	-0.3
110,209	-		Dshi_3702	0.47	+0.1
110,209	-		Dshi_3702	0.47	-1.4
110,209	-		Dshi_3702	0.47	+0.6
110,209	-		Dshi_3702	0.47	+0.4
110,212	+		Dshi_3702	0.47	-0.5
110,212	+		Dshi_3702	0.47	-0.3
110,212	+		Dshi_3702	0.47	+1.0
110,220	-		Dshi_3702	0.48	-0.4
110,220	-		Dshi_3702	0.48	-0.4
110,225	-		Dshi_3702	0.49	-0.3
110,238	+		Dshi_3702	0.50	-2.7
110,238	+		Dshi_3702	0.50	-0.3
110,238	+		Dshi_3702	0.50	+0.7
110,238	+		Dshi_3702	0.50	-0.4
110,246	-		Dshi_3702	0.51	+2.0
110,246	-		Dshi_3702	0.51	-0.5
110,248	+		Dshi_3702	0.51	-0.6
110,248	+		Dshi_3702	0.51	-1.0
110,248	+		Dshi_3702	0.51	+0.8
110,248	+		Dshi_3702	0.51	-0.3
110,248	+		Dshi_3702	0.51	-1.0
110,248	+		Dshi_3702	0.51	+0.0
110,248	+		Dshi_3702	0.51	-2.8
110,248	+		Dshi_3702	0.51	-0.3
110,248	+		Dshi_3702	0.51	+0.4
110,248	+		Dshi_3702	0.51	+0.1
110,248	+		Dshi_3702	0.51	-0.3
110,248	+		Dshi_3702	0.51	-1.4
110,248	+		Dshi_3702	0.51	+0.2
110,248	+		Dshi_3702	0.51	-0.2
110,248	+		Dshi_3702	0.51	-0.7
110,248	+		Dshi_3702	0.51	+0.3
110,248	+		Dshi_3702	0.51	-1.7
110,256	-		Dshi_3702	0.52	+1.2
110,256	-		Dshi_3702	0.52	-1.2
110,256	-		Dshi_3702	0.52	-0.8
110,256	-		Dshi_3702	0.52	+2.8
110,256	-		Dshi_3702	0.52	-1.3
110,256	-		Dshi_3702	0.52	+0.3
110,256	-		Dshi_3702	0.52	+0.7
110,256	-		Dshi_3702	0.52	-0.9
110,256	-		Dshi_3702	0.52	-0.5
110,256	-		Dshi_3702	0.52	-0.7
110,256	-		Dshi_3702	0.52	+2.2
110,264	+		Dshi_3702	0.53	-0.5
110,279	-		Dshi_3702	0.55	+0.6
110,312	+		Dshi_3702	0.59	+0.6
110,312	+		Dshi_3702	0.59	+0.1
110,333	+		Dshi_3702	0.61	-0.8
110,333	+		Dshi_3702	0.61	-0.1
110,336	-		Dshi_3702	0.62	-0.9
110,338	+		Dshi_3702	0.62	+1.8
110,339	+		Dshi_3702	0.62	-1.2
110,344	+		Dshi_3702	0.63	-1.2
110,344	+		Dshi_3702	0.63	+0.2
110,344	+		Dshi_3702	0.63	+1.4
110,346	+		Dshi_3702	0.63	-0.8
110,349	+		Dshi_3702	0.63	+0.0
110,349	+		Dshi_3702	0.63	-0.0
110,349	+		Dshi_3702	0.63	+1.0
110,349	+		Dshi_3702	0.63	+0.9
110,349	+		Dshi_3702	0.63	-0.8
110,349	+		Dshi_3702	0.63	-0.9
110,352	-		Dshi_3702	0.64	-2.3
110,352	-		Dshi_3702	0.64	+0.4
110,352	-		Dshi_3702	0.64	-1.7
110,354	-		Dshi_3702	0.64	-0.6
110,357	-		Dshi_3702	0.64	+0.2
110,357	-		Dshi_3702	0.64	+0.7
110,357	-		Dshi_3702	0.64	-0.0
110,358	+		Dshi_3702	0.64	+2.3
110,362	-		Dshi_3702	0.65	-0.5
110,372	+		Dshi_3702	0.66	-0.9
110,377	+		Dshi_3702	0.67	-1.7
110,378	+		Dshi_3702	0.67	+0.1
110,383	+		Dshi_3702	0.67	-1.8
110,383	+		Dshi_3702	0.67	-0.2
110,383	+		Dshi_3702	0.67	+0.1
110,383	+		Dshi_3702	0.67	-0.2
110,383	+		Dshi_3702	0.67	-1.8
110,383	+		Dshi_3702	0.67	-2.4
110,383	+		Dshi_3702	0.67	-1.9
110,383	+		Dshi_3702	0.67	-0.3
110,383	+		Dshi_3702	0.67	+0.9
110,383	+		Dshi_3702	0.67	-0.1
110,383	+		Dshi_3702	0.67	-0.9
110,386	-		Dshi_3702	0.68	-0.1
110,388	+		Dshi_3702	0.68	+0.1
110,388	+		Dshi_3702	0.68	-0.3
110,388	+		Dshi_3702	0.68	-0.4
110,388	+		Dshi_3702	0.68	+2.3
110,388	+		Dshi_3702	0.68	+0.9
110,388	+		Dshi_3702	0.68	+0.5
110,388	+		Dshi_3702	0.68	-0.3
110,391	-		Dshi_3702	0.68	+0.3
110,391	-		Dshi_3702	0.68	-0.1
110,391	-		Dshi_3702	0.68	+1.9
110,391	-		Dshi_3702	0.68	-1.4
110,391	-		Dshi_3702	0.68	-1.4
110,391	-		Dshi_3702	0.68	-4.0
110,393	+		Dshi_3702	0.69	-0.2
110,396	-		Dshi_3702	0.69	-2.1
110,396	-		Dshi_3702	0.69	+0.7
110,396	-		Dshi_3702	0.69	+1.2
110,396	-		Dshi_3702	0.69	-2.7
110,396	-		Dshi_3702	0.69	-0.6
110,396	-		Dshi_3702	0.69	-0.9
110,396	-		Dshi_3702	0.69	-0.9
110,396	-		Dshi_3702	0.69	-1.3
110,398	+		Dshi_3702	0.69	-0.4
110,398	-		Dshi_3702	0.69	+1.0
110,400	+		Dshi_3702	0.69	-1.0
110,401	-		Dshi_3702	0.70	-0.1
110,408	-		Dshi_3702	0.70	-0.1
110,408	-		Dshi_3702	0.70	+0.1
110,408	-		Dshi_3702	0.70	-0.4
110,408	-		Dshi_3702	0.70	+0.7
110,410	+		Dshi_3702	0.71	-2.8
110,418	-		Dshi_3702	0.72	-1.2
110,432	+		Dshi_3702	0.73	+0.3
110,438	-		Dshi_3702	0.74	-3.3
110,440	-		Dshi_3702	0.74	-0.0
110,456	-		Dshi_3702	0.76	+0.7
110,461	-		Dshi_3702	0.77	+0.5
110,465	+		Dshi_3702	0.77	+3.6
110,465	+		Dshi_3702	0.77	-0.6
110,471	-		Dshi_3702	0.78	+0.3
110,473	+		Dshi_3702	0.78	-1.0
110,473	+		Dshi_3702	0.78	-3.1
110,473	+		Dshi_3702	0.78	+0.2
110,473	+		Dshi_3702	0.78	-0.2
110,473	+		Dshi_3702	0.78	+1.2
110,473	-		Dshi_3702	0.78	-0.2
110,478	+		Dshi_3702	0.79	+2.4
110,499	+		Dshi_3702	0.81	-1.1
110,504	+		Dshi_3702	0.82	-2.1
110,504	+		Dshi_3702	0.82	-0.3
110,507	-		Dshi_3702	0.82	-0.2
110,507	-		Dshi_3702	0.82	-0.8
110,507	-		Dshi_3702	0.82	+0.4
110,512	+		Dshi_3702	0.83	+0.4
110,512	+		Dshi_3702	0.83	+1.2
110,512	-		Dshi_3702	0.83	-0.0
110,514	+		Dshi_3702	0.83	+1.0
110,514	+		Dshi_3702	0.83	-1.5
110,522	-		Dshi_3702	0.84	+0.0
110,525	+		Dshi_3702	0.84	-1.5
110,528	-		Dshi_3702	0.85	+0.1
110,528	-		Dshi_3702	0.85	+0.2
110,530	+		Dshi_3702	0.85	-0.0
110,553	+		Dshi_3702	0.88	-1.0
110,553	+		Dshi_3702	0.88	+0.3
110,553	+		Dshi_3702	0.88	-1.1
110,561	-		Dshi_3702	0.89	+0.8
110,561	-		Dshi_3702	0.89	-1.2
110,568	+		Dshi_3702	0.89	-0.7
110,571	-		Dshi_3702	0.90	-0.0
110,608	+				+0.2
110,608	+				-0.1
110,608	+				+1.6
110,609	+				-1.1
110,609	+				+3.3
110,609	+				+0.6
110,614	-				-0.7
110,617	-				-0.3
110,617	-				+0.2
110,617	-				-0.4
110,623	+				-1.0
110,623	+				+0.6
110,627	+				-0.2
110,631	-				+0.2
110,631	-				-0.4
110,631	-				-1.2
110,642	+				+1.4
110,649	-				+0.1
110,650	-				-1.7
110,651	+				-0.9
110,651	+				+2.1
110,651	+				-0.1
110,651	+				+0.2
110,651	-				-0.3
110,654	-				-0.9
110,656	+				+0.4
110,659	-				-0.0
110,661	+				-1.0
110,664	-				+0.1
110,669	-				+0.5
110,671	-				-1.9
110,688	+				-0.9
110,690	+				-0.4
110,690	+				-0.0
110,690	+				-4.7
110,693	+				+0.2
110,696	-				-1.2
110,696	-				+1.2
110,696	-				-0.7
110,698	+				-0.3
110,703	+				-0.8
110,703	-				-0.5
110,703	-				-0.2
110,706	-				-0.3
110,706	-				-0.5
110,708	+				-1.0
110,708	+				-0.7
110,708	+				+0.4
110,708	+				-1.8
110,708	+				-0.9
110,708	+				+3.3
110,708	+				-1.4
110,708	-				-0.0
110,716	-				-0.5
110,716	-				-0.7
110,719	+				-0.4
110,727	+				-0.9
110,730	-				+2.1
110,770	+				-0.3
110,777	+				-0.4
110,777	+				-1.2
110,777	+				-0.5
110,777	+				-2.0
110,777	+				-0.9
110,777	+				-0.5
110,777	+				-1.2
110,777	+				+1.0
110,777	+				-0.2
110,777	+				+0.5
110,777	+				-0.3
110,777	+				-0.4
110,783	-				+1.2
110,785	-				+0.7
110,785	-				-0.3
110,785	-				-0.1
110,785	-				-0.4
110,785	-				-1.0
110,785	-				+1.1
110,785	-				+0.2
110,785	-				-0.9
110,785	-				-1.7
110,787	+				+1.1
110,787	+				-1.0
110,789	+				-1.1
110,789	+				-0.8
110,795	-				-0.5
110,797	-				-1.0
110,797	-				-0.3
110,810	-				-1.6
110,810	-				-0.9
110,810	-				-0.8
110,832	-				-0.0
110,846	-				+0.2
110,847	+				-0.3
110,847	+				+0.2
110,847	+				+0.4
110,847	+				-0.1
110,847	+				+0.1
110,847	+				+0.7
110,847	+				+0.9
110,855	-				-0.1
110,855	-				-0.5
110,855	-				+1.5
110,855	-				+1.0
110,855	-				-0.1
110,855	-				-0.4
110,855	-				-0.1
110,855	-				-1.5
110,860	-				+0.4
110,882	+				-0.8
110,896	-				+0.6
110,907	-				-0.5
110,918	+				+3.1
110,922	-				-0.4
110,922	-				-0.8
110,923	+				-2.0
110,924	+				-0.3
110,925	+				-0.7
110,926	-				-0.9
110,945	+				-1.4
110,945	+				+1.1
110,945	+				-1.9
110,945	+				+0.9
110,945	+				+0.5
110,945	+				-1.9
110,945	+				-1.5
110,953	-				-0.1
110,953	-				-1.5
110,961	+				-0.9
110,961	+				+1.6
110,968	+				-0.4
110,969	+				+0.8
110,978	+				-0.1
110,979	+				-0.6
111,009	-				-0.4
111,011	+				-0.3
111,018	+				-1.5
111,024	+				+0.2
111,024	+				-0.8
111,026	-				-0.0
111,055	+				-2.1
111,102	-		Dshi_3703	0.11	+2.0
111,110	+		Dshi_3703	0.12	+0.5
111,112	-		Dshi_3703	0.12	+1.5
111,118	+		Dshi_3703	0.12	+0.2
111,118	-		Dshi_3703	0.12	-1.0
111,126	-		Dshi_3703	0.13	-0.9
111,126	-		Dshi_3703	0.13	-1.7
111,136	-		Dshi_3703	0.14	-0.1
111,172	-		Dshi_3703	0.17	-1.2
111,192	-		Dshi_3703	0.19	+0.3
111,193	+		Dshi_3703	0.19	+0.5
111,195	+		Dshi_3703	0.19	-1.2
111,195	+		Dshi_3703	0.19	-0.9
111,203	+		Dshi_3703	0.20	-0.3
111,230	+		Dshi_3703	0.22	-0.4
111,230	+		Dshi_3703	0.22	-0.5
111,231	-		Dshi_3703	0.22	+0.0
111,231	-		Dshi_3703	0.22	-0.4
111,282	-		Dshi_3703	0.27	+0.4
111,307	+		Dshi_3703	0.29	+3.3
111,309	+		Dshi_3703	0.29	+0.8
111,315	-		Dshi_3703	0.30	-0.2
111,315	-		Dshi_3703	0.30	-1.4
111,315	-		Dshi_3703	0.30	-0.6
111,329	-		Dshi_3703	0.31	-0.1
111,379	+		Dshi_3703	0.35	-0.8
111,386	+		Dshi_3703	0.36	+0.2
111,391	+		Dshi_3703	0.37	-0.7
111,391	+		Dshi_3703	0.37	+1.8
111,399	-		Dshi_3703	0.37	-2.7
111,399	-		Dshi_3703	0.37	-0.1
111,429	+		Dshi_3703	0.40	-1.0
111,431	+		Dshi_3703	0.40	+2.5
111,460	-		Dshi_3703	0.43	-0.3
111,483	-		Dshi_3703	0.45	+1.3
111,502	-		Dshi_3703	0.46	+1.0
111,504	+		Dshi_3703	0.46	-1.1
111,504	-		Dshi_3703	0.46	-0.4
111,513	+		Dshi_3703	0.47	-0.5
111,513	+		Dshi_3703	0.47	-0.7
111,521	-		Dshi_3703	0.48	+0.1
111,569	+		Dshi_3703	0.52	-0.3
111,585	-		Dshi_3703	0.54	+1.5
111,587	+		Dshi_3703	0.54	+0.4
111,595	-		Dshi_3703	0.54	-3.2
111,596	-		Dshi_3703	0.55	+0.7
111,596	-		Dshi_3703	0.55	-0.9
111,646	+		Dshi_3703	0.59	+2.6
111,664	+		Dshi_3703	0.61	+0.4
111,672	-		Dshi_3703	0.61	-0.5
111,681	+		Dshi_3703	0.62	+0.8
111,689	-		Dshi_3703	0.63	-0.3
111,689	-		Dshi_3703	0.63	+0.6
111,716	+		Dshi_3703	0.65	+2.5
111,736	-		Dshi_3703	0.67	-0.8
111,736	-		Dshi_3703	0.67	+1.4
111,743	+		Dshi_3703	0.68	-1.2
111,745	-		Dshi_3703	0.68	-2.5
111,799	+		Dshi_3703	0.72	+0.3
111,814	-		Dshi_3703	0.74	+0.4
111,850	+		Dshi_3703	0.77	-0.8
111,856	-		Dshi_3703	0.77	+1.1
111,876	+		Dshi_3703	0.79	-0.3
111,876	+		Dshi_3703	0.79	+1.0
111,884	-		Dshi_3703	0.80	+0.3
111,884	-		Dshi_3703	0.80	-1.6
111,893	+		Dshi_3703	0.81	-0.1
111,898	-		Dshi_3703	0.81	-1.5
111,903	+		Dshi_3703	0.82	-1.1
111,903	+		Dshi_3703	0.82	-1.3
111,903	+		Dshi_3703	0.82	-0.6
111,911	-		Dshi_3703	0.82	+0.7
111,911	-		Dshi_3703	0.82	-0.2
111,911	-		Dshi_3703	0.82	-0.3
111,913	+		Dshi_3703	0.82	+0.3
111,957	+		Dshi_3703	0.86	-1.0
111,975	-		Dshi_3703	0.88	-0.4
111,975	-		Dshi_3703	0.88	-1.6
111,977	+		Dshi_3703	0.88	+3.4
111,985	-		Dshi_3703	0.89	-1.3
112,002	+				-1.3
112,004	-				-0.9
112,017	-				-0.1
112,035	-				-0.4
112,048	+				-1.0
112,048	+				-0.5
112,049	+				+0.4
112,056	-				-0.0
112,056	-				+0.8
112,056	-				-1.1
112,056	-				-0.0
112,093	+				-0.1
112,093	+				-0.5
112,093	+				-0.6
112,093	+				-0.3
112,101	-				+0.7
112,101	-				-0.3
112,101	-				-0.2
112,101	-				+1.1
112,101	-				-0.7
112,101	-				+0.7
112,101	-				-1.0
112,101	-				+0.1
112,101	-				-0.0
112,101	-				-0.2
112,101	-				-0.6
112,101	-				+0.4
112,101	-				-1.0
112,101	-				-0.2
112,103	+				-1.6
112,103	+				-0.4
112,103	+				-1.1
112,103	+				+0.0
112,103	+				-0.9
112,103	+				-1.5
112,103	+				+0.3
112,103	+				-0.9
112,103	+				-0.7
112,103	+				+0.5
112,103	+				+0.5
112,103	+				-0.2
112,103	+				+0.7
112,103	+				-0.3
112,105	+				+3.6
112,111	-				-0.5
112,111	-				+1.6
112,111	-				-1.5
112,111	-				+0.4
112,111	-				+0.7
112,111	-				-0.8
112,111	-				-1.5
112,111	-				-1.2
112,111	-				-1.3
112,111	-				+0.8
112,111	-				-0.6
112,111	-				+1.2
112,111	-				-0.4
112,111	-				-0.0
112,111	-				+0.3
112,111	-				-0.1
112,111	-				-0.0
112,111	-				-0.8
112,113	-				-1.7
112,113	-				+0.7
112,113	-				-0.2
112,146	-				-0.8