Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3570 and Dshi_3571 are separated by 75 nucleotides Dshi_3571 and Dshi_3572 are separated by 165 nucleotides Dshi_3572 and Dshi_3573 are separated by 30 nucleotides
Dshi_3570: Dshi_3570 - chaperone protein DnaJ (RefSeq), at 3,759,367 to 3,760,518
_3570
Dshi_3571: Dshi_3571 - chaperone protein DnaK (RefSeq), at 3,760,594 to 3,762,513
_3571
Dshi_3572: Dshi_3572 - 2OG-Fe(II) oxygenase (RefSeq), at 3,762,679 to 3,763,314
_3572
Dshi_3573: Dshi_3573 - ABC-2 type transporter (RefSeq), at 3,763,345 to 3,764,166
_3573
Position (kb)
3760
3761
3762
3763 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3762.653 kb on + strand at 3762.669 kb on - strand at 3762.671 kb on + strand at 3762.671 kb on + strand at 3762.759 kb on - strand, within Dshi_3572 at 3762.760 kb on - strand, within Dshi_3572 at 3762.784 kb on + strand, within Dshi_3572 at 3762.791 kb on - strand, within Dshi_3572 at 3762.798 kb on - strand, within Dshi_3572 at 3762.849 kb on + strand, within Dshi_3572 at 3762.863 kb on + strand, within Dshi_3572 at 3762.907 kb on + strand, within Dshi_3572 at 3762.915 kb on - strand, within Dshi_3572 at 3762.915 kb on - strand, within Dshi_3572 at 3762.915 kb on - strand, within Dshi_3572 at 3762.927 kb on - strand, within Dshi_3572 at 3762.986 kb on + strand, within Dshi_3572 at 3762.998 kb on - strand, within Dshi_3572 at 3763.007 kb on + strand, within Dshi_3572 at 3763.044 kb on + strand, within Dshi_3572 at 3763.054 kb on + strand, within Dshi_3572 at 3763.054 kb on + strand, within Dshi_3572 at 3763.062 kb on - strand, within Dshi_3572 at 3763.062 kb on - strand, within Dshi_3572 at 3763.068 kb on - strand, within Dshi_3572 at 3763.082 kb on + strand, within Dshi_3572 at 3763.128 kb on + strand, within Dshi_3572 at 3763.138 kb on + strand, within Dshi_3572 at 3763.178 kb on - strand, within Dshi_3572 at 3763.242 kb on + strand, within Dshi_3572 at 3763.256 kb on + strand at 3763.284 kb on - strand at 3763.318 kb on - strand at 3763.318 kb on - strand at 3763.331 kb on + strand at 3763.339 kb on - strand at 3763.339 kb on - strand at 3763.358 kb on + strand at 3763.444 kb on + strand, within Dshi_3573 at 3763.444 kb on + strand, within Dshi_3573 at 3763.492 kb on + strand, within Dshi_3573 at 3763.505 kb on + strand, within Dshi_3573
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 3,762,653 + -0.6 3,762,669 - +0.1 3,762,671 + +0.0 3,762,671 + +0.4 3,762,759 - Dshi_3572 0.13 -0.1 3,762,760 - Dshi_3572 0.13 +1.2 3,762,784 + Dshi_3572 0.17 -1.9 3,762,791 - Dshi_3572 0.18 -3.4 3,762,798 - Dshi_3572 0.19 -1.4 3,762,849 + Dshi_3572 0.27 +2.0 3,762,863 + Dshi_3572 0.29 +1.0 3,762,907 + Dshi_3572 0.36 +0.0 3,762,915 - Dshi_3572 0.37 +2.0 3,762,915 - Dshi_3572 0.37 -1.0 3,762,915 - Dshi_3572 0.37 -1.5 3,762,927 - Dshi_3572 0.39 -1.5 3,762,986 + Dshi_3572 0.48 -2.0 3,762,998 - Dshi_3572 0.50 -0.9 3,763,007 + Dshi_3572 0.52 -3.4 3,763,044 + Dshi_3572 0.57 +2.4 3,763,054 + Dshi_3572 0.59 +2.5 3,763,054 + Dshi_3572 0.59 -0.6 3,763,062 - Dshi_3572 0.60 +1.4 3,763,062 - Dshi_3572 0.60 +0.9 3,763,068 - Dshi_3572 0.61 -1.3 3,763,082 + Dshi_3572 0.63 -0.4 3,763,128 + Dshi_3572 0.71 +0.5 3,763,138 + Dshi_3572 0.72 +0.4 3,763,178 - Dshi_3572 0.78 -3.6 3,763,242 + Dshi_3572 0.89 +1.6 3,763,256 + +0.0 3,763,284 - -1.5 3,763,318 - -0.1 3,763,318 - -2.9 3,763,331 + +1.8 3,763,339 - +2.4 3,763,339 - -1.0 3,763,358 + -1.4 3,763,444 + Dshi_3573 0.12 +0.0 3,763,444 + Dshi_3573 0.12 -1.7 3,763,492 + Dshi_3573 0.18 +0.0 3,763,505 + Dshi_3573 0.19 +0.7
Or see this region's nucleotide sequence