Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2936

Experiment: m.b. copper (II) chloride 0.64 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_2934 and Dshi_2935 are separated by 17 nucleotidesDshi_2935 and Dshi_2936 are separated by 12 nucleotidesDshi_2936 and Dshi_2937 are separated by 0 nucleotidesDshi_2937 and Dshi_2938 are separated by 286 nucleotides Dshi_2934: Dshi_2934 - ATP synthase F1, beta subunit (RefSeq), at 3,090,391 to 3,091,815 _2934 Dshi_2935: Dshi_2935 - ATP synthase F1, gamma subunit (RefSeq), at 3,091,833 to 3,092,705 _2935 Dshi_2936: Dshi_2936 - ATP synthase F1, alpha subunit (RefSeq), at 3,092,718 to 3,094,256 _2936 Dshi_2937: Dshi_2937 - ATP synthase F1, delta subunit (RefSeq), at 3,094,257 to 3,094,817 _2937 Dshi_2938: Dshi_2938 - hypothetical protein (RefSeq), at 3,095,104 to 3,095,874 _2938 Position (kb) 3092 3093 3094 3095Strain fitness (log2 ratio) -1 0 1at 3094.965 kb on - strandat 3094.971 kb on - strandat 3095.090 kb on - strandat 3095.090 kb on - strandat 3095.173 kb on - strandat 3095.173 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM
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3,094,965 - -1.4
3,094,971 - -1.7
3,095,090 - -1.2
3,095,090 - +0.8
3,095,173 - +1.0
3,095,173 - +1.3

Or see this region's nucleotide sequence