Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2891 and Dshi_2892 are separated by 112 nucleotides Dshi_2892 and Dshi_2893 are separated by 139 nucleotides Dshi_2893 and Dshi_2894 are separated by 63 nucleotides
Dshi_2891: Dshi_2891 - short-chain dehydrogenase/reductase SDR (RefSeq), at 3,046,819 to 3,047,547
_2891
Dshi_2892: Dshi_2892 - heat shock protein Hsp20 (RefSeq), at 3,047,660 to 3,048,118
_2892
Dshi_2893: Dshi_2893 - peptidase S1 and S6 chymotrypsin/Hap (RefSeq), at 3,048,258 to 3,049,076
_2893
Dshi_2894: Dshi_2894 - protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq), at 3,049,140 to 3,050,444
_2894
Position (kb)
3048
3049
3050 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3047.267 kb on + strand, within Dshi_2891 at 3047.290 kb on - strand, within Dshi_2891 at 3047.455 kb on - strand, within Dshi_2891 at 3047.581 kb on - strand at 3048.137 kb on - strand at 3048.156 kb on + strand at 3048.264 kb on - strand at 3048.264 kb on - strand at 3048.336 kb on + strand at 3048.352 kb on + strand, within Dshi_2893 at 3048.357 kb on + strand, within Dshi_2893 at 3048.441 kb on - strand, within Dshi_2893 at 3048.480 kb on + strand, within Dshi_2893 at 3048.488 kb on - strand, within Dshi_2893 at 3048.715 kb on - strand, within Dshi_2893 at 3048.890 kb on + strand, within Dshi_2893 at 3048.898 kb on - strand, within Dshi_2893 at 3049.122 kb on - strand at 3049.131 kb on + strand at 3049.148 kb on + strand at 3049.153 kb on + strand at 3049.153 kb on + strand at 3049.360 kb on + strand, within Dshi_2894 at 3049.452 kb on - strand, within Dshi_2894 at 3049.452 kb on - strand, within Dshi_2894 at 3049.529 kb on + strand, within Dshi_2894 at 3049.555 kb on - strand, within Dshi_2894 at 3049.810 kb on - strand, within Dshi_2894 at 3049.976 kb on + strand, within Dshi_2894 at 3050.004 kb on + strand, within Dshi_2894 at 3050.010 kb on - strand, within Dshi_2894
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 3,047,267 + Dshi_2891 0.61 +0.3 3,047,290 - Dshi_2891 0.65 -0.3 3,047,455 - Dshi_2891 0.87 -2.3 3,047,581 - -4.0 3,048,137 - -1.3 3,048,156 + -0.2 3,048,264 - -0.3 3,048,264 - -0.8 3,048,336 + +0.3 3,048,352 + Dshi_2893 0.11 -1.7 3,048,357 + Dshi_2893 0.12 -1.7 3,048,441 - Dshi_2893 0.22 +2.2 3,048,480 + Dshi_2893 0.27 -0.7 3,048,488 - Dshi_2893 0.28 +0.5 3,048,715 - Dshi_2893 0.56 -0.2 3,048,890 + Dshi_2893 0.77 +0.3 3,048,898 - Dshi_2893 0.78 +0.9 3,049,122 - -1.2 3,049,131 + -0.1 3,049,148 + -2.9 3,049,153 + -3.0 3,049,153 + +0.4 3,049,360 + Dshi_2894 0.17 -1.8 3,049,452 - Dshi_2894 0.24 +1.5 3,049,452 - Dshi_2894 0.24 -1.6 3,049,529 + Dshi_2894 0.30 +3.0 3,049,555 - Dshi_2894 0.32 +1.5 3,049,810 - Dshi_2894 0.51 -1.3 3,049,976 + Dshi_2894 0.64 +0.3 3,050,004 + Dshi_2894 0.66 +0.3 3,050,010 - Dshi_2894 0.67 -0.2
Or see this region's nucleotide sequence