Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2550

Experiment: m.b. copper (II) chloride 0.64 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. copper (II) chloride 0.64 mM
2,708,516	+		Dshi_2549	0.38	-1.3
2,708,536	+		Dshi_2549	0.39	+0.1
2,708,550	-		Dshi_2549	0.40	-0.0
2,708,673	-		Dshi_2549	0.48	+0.6
2,708,712	+		Dshi_2549	0.51	-1.3
2,708,712	+		Dshi_2549	0.51	+0.3
2,708,719	+		Dshi_2549	0.51	-1.2
2,708,720	-		Dshi_2549	0.51	-0.6
2,708,768	-		Dshi_2549	0.55	+0.2
2,708,832	+		Dshi_2549	0.59	+0.1
2,708,832	+		Dshi_2549	0.59	-0.7
2,708,837	+		Dshi_2549	0.59	+0.9
2,708,868	-		Dshi_2549	0.61	-1.0
2,708,903	+		Dshi_2549	0.64	-0.2
2,708,944	-		Dshi_2549	0.67	-0.2
2,709,087	+		Dshi_2549	0.76	-0.6
2,709,172	-		Dshi_2549	0.82	+0.9
2,709,329	+				-0.3
2,709,332	-				+1.9
2,709,333	+				+1.1
2,709,333	+				-0.3
2,709,333	+				-0.2
2,709,334	+				-0.2
2,709,337	-				+2.7
2,709,342	-				-0.9
2,709,371	-				-1.8
2,709,445	+				-1.4
2,709,447	+				+2.4
2,709,490	+				+0.4
2,709,496	-				+0.2
2,709,532	-				-1.5
2,709,581	+				+1.6
2,709,619	-				-2.3
2,709,641	-				+0.3
2,709,725	-				+1.1
2,709,747	+				+1.1
2,709,869	+				+0.7
2,709,896	-		Dshi_2550	0.10	+0.9
2,709,915	+		Dshi_2550	0.10	-1.2
2,709,944	+		Dshi_2550	0.11	-0.9
2,709,952	-		Dshi_2550	0.11	+0.6
2,709,952	-		Dshi_2550	0.11	-0.1
2,710,014	+		Dshi_2550	0.13	-0.0
2,710,023	+		Dshi_2550	0.13	+0.1
2,710,115	+		Dshi_2550	0.15	-0.4
2,710,125	+		Dshi_2550	0.15	+0.3
2,710,144	+		Dshi_2550	0.16	-2.3
2,710,167	+		Dshi_2550	0.16	-0.3
2,710,196	+		Dshi_2550	0.17	-0.2
2,710,204	-		Dshi_2550	0.17	+0.6
2,710,206	+		Dshi_2550	0.17	-0.6
2,710,206	+		Dshi_2550	0.17	+0.8
2,710,237	-		Dshi_2550	0.18	-0.7
2,710,297	+		Dshi_2550	0.19	+1.5
2,710,301	+		Dshi_2550	0.19	-0.8
2,710,303	+		Dshi_2550	0.19	-0.7
2,710,308	+		Dshi_2550	0.19	+1.7
2,710,313	+		Dshi_2550	0.19	-0.6
2,710,313	+		Dshi_2550	0.19	+2.9
2,710,316	-		Dshi_2550	0.20	+0.1
2,710,316	-		Dshi_2550	0.20	+1.2
2,710,316	-		Dshi_2550	0.20	+4.0
2,710,319	+		Dshi_2550	0.20	-0.9
2,710,326	+		Dshi_2550	0.20	-1.3
2,710,327	-		Dshi_2550	0.20	+0.1
2,710,346	-		Dshi_2550	0.20	-1.2
2,710,365	+		Dshi_2550	0.21	-1.2
2,710,377	+		Dshi_2550	0.21	-1.0
2,710,385	-		Dshi_2550	0.21	+0.4
2,710,416	+		Dshi_2550	0.22	+0.2
2,710,416	+		Dshi_2550	0.22	+0.5
2,710,419	-		Dshi_2550	0.22	-0.8
2,710,421	+		Dshi_2550	0.22	-0.3
2,710,424	-		Dshi_2550	0.22	-0.5
2,710,429	-		Dshi_2550	0.22	-1.3
2,710,477	-		Dshi_2550	0.23	-0.1
2,710,479	+		Dshi_2550	0.23	+0.1
2,710,479	+		Dshi_2550	0.23	+0.3
2,710,506	+		Dshi_2550	0.24	+1.3
2,710,509	-		Dshi_2550	0.24	+1.5
2,710,545	-		Dshi_2550	0.25	+0.1
2,710,574	+		Dshi_2550	0.25	-1.8
2,710,592	-		Dshi_2550	0.26	+1.3
2,710,644	-		Dshi_2550	0.27	+1.8
2,710,644	-		Dshi_2550	0.27	+0.1
2,710,739	+		Dshi_2550	0.29	+0.9
2,710,766	+		Dshi_2550	0.30	+1.5
2,710,774	-		Dshi_2550	0.30	+1.5
2,710,774	-		Dshi_2550	0.30	-0.6
2,710,774	-		Dshi_2550	0.30	-0.4
2,710,806	+		Dshi_2550	0.31	+0.0
2,710,826	+		Dshi_2550	0.31	-0.6
2,710,826	+				+0.1
2,710,826	+		Dshi_2550	0.31	+1.1
2,710,826	+		Dshi_2550	0.31	-1.4
2,710,831	+		Dshi_2550	0.31	-0.3
2,710,834	-		Dshi_2550	0.31	+0.8
2,710,834	-		Dshi_2550	0.31	-0.7
2,710,855	+		Dshi_2550	0.32	+0.1
2,710,863	-		Dshi_2550	0.32	-0.5
2,710,898	-		Dshi_2550	0.33	+0.4
2,710,910	-		Dshi_2550	0.33	+0.1
2,710,912	+		Dshi_2550	0.33	-0.1
2,710,933	-		Dshi_2550	0.33	+2.9
2,710,944	-		Dshi_2550	0.34	+2.7
2,710,960	+		Dshi_2550	0.34	+0.1
2,710,960	+		Dshi_2550	0.34	+0.6
2,710,960	+		Dshi_2550	0.34	+0.1
2,710,990	+		Dshi_2550	0.35	-1.2
2,710,995	+		Dshi_2550	0.35	-0.3
2,710,996	+		Dshi_2550	0.35	+0.4
2,711,004	-		Dshi_2550	0.35	-0.2
2,711,004	-		Dshi_2550	0.35	-0.5
2,711,004	-		Dshi_2550	0.35	-0.4
2,711,004	-		Dshi_2550	0.35	+0.1
2,711,006	+		Dshi_2550	0.35	+1.9
2,711,014	-		Dshi_2550	0.35	-0.3
2,711,014	-		Dshi_2550	0.35	+0.9
2,711,057	-		Dshi_2550	0.36	+0.3
2,711,057	-		Dshi_2550	0.36	-0.8
2,711,172	+		Dshi_2550	0.39	+0.9
2,711,172	+		Dshi_2550	0.39	-0.4
2,711,294	+		Dshi_2550	0.42	+2.1
2,711,304	-		Dshi_2550	0.42	-2.4
2,711,309	-		Dshi_2550	0.42	+1.6
2,711,383	-		Dshi_2550	0.44	+1.1
2,711,407	+		Dshi_2550	0.44	+3.0
2,711,436	-		Dshi_2550	0.45	+3.1
2,711,493	-		Dshi_2550	0.46	-1.7
2,711,495	-		Dshi_2550	0.46	-0.8
2,711,512	+		Dshi_2550	0.47	-0.4
2,711,513	-		Dshi_2550	0.47	-3.7
2,711,520	-		Dshi_2550	0.47	-1.1
2,711,539	-		Dshi_2550	0.47	-3.1
2,711,557	-		Dshi_2550	0.48	+4.1
2,711,573	-		Dshi_2550	0.48	-0.1
2,711,573	-		Dshi_2550	0.48	-0.1
2,711,588	-		Dshi_2550	0.48	-0.9
2,711,593	-		Dshi_2550	0.48	+1.1
2,711,639	+		Dshi_2550	0.49	+0.7
2,711,641	-		Dshi_2550	0.50	-0.1
2,711,687	+		Dshi_2550	0.51	-0.6
2,711,687	+		Dshi_2550	0.51	-0.4
2,711,687	+		Dshi_2550	0.51	-0.2
2,711,687	+		Dshi_2550	0.51	-2.6
2,711,695	-		Dshi_2550	0.51	+0.7
2,711,695	-		Dshi_2550	0.51	-0.6
2,711,767	+		Dshi_2550	0.52	-0.9
2,711,788	+		Dshi_2550	0.53	-0.2
2,711,830	-		Dshi_2550	0.54	-2.4
2,711,845	+		Dshi_2550	0.54	+2.4
2,711,874	-		Dshi_2550	0.55	-0.6
2,711,900	+		Dshi_2550	0.55	+0.7
2,712,027	-		Dshi_2550	0.58	+1.9
2,712,133	-		Dshi_2550	0.61	+0.4
2,712,166	-		Dshi_2550	0.61	-0.2
2,712,246	-		Dshi_2550	0.63	-0.9
2,712,261	-		Dshi_2550	0.64	-1.5
2,712,325	-		Dshi_2550	0.65	-1.4
2,712,363	+		Dshi_2550	0.66	-0.7
2,712,390	+		Dshi_2550	0.66	-0.0
2,712,449	+		Dshi_2550	0.68	-0.6
2,712,596	-		Dshi_2550	0.71	-0.9
2,712,619	-		Dshi_2550	0.72	+0.1
2,712,683	-		Dshi_2550	0.73	+0.1
2,712,685	+		Dshi_2550	0.73	+0.1
2,712,704	+		Dshi_2550	0.74	-0.6
2,712,712	-		Dshi_2550	0.74	-1.7
2,712,712	-		Dshi_2550	0.74	-3.0
2,712,712	-		Dshi_2550	0.74	+2.7
2,712,713	+		Dshi_2550	0.74	-0.3
2,712,761	+		Dshi_2550	0.75	+3.3
2,712,823	+		Dshi_2550	0.76	+1.3
2,712,826	-		Dshi_2550	0.76	+2.7
2,712,831	-		Dshi_2550	0.76	-0.9
2,712,838	-		Dshi_2550	0.77	-1.9
2,712,886	+		Dshi_2550	0.78	+1.1
2,713,000	-		Dshi_2550	0.80	-2.5
2,713,284	+		Dshi_2550	0.87	+0.1
2,713,304	-		Dshi_2550	0.87	-1.5
2,713,401	+		Dshi_2550	0.89	+0.4
2,713,461	-				+0.4
2,713,480	-				+0.4
2,713,582	+				-0.4
2,713,582	+				+0.8
2,713,582	+				-3.2
2,713,589	-				-0.6
2,713,634	+				-2.5
2,713,679	-				+0.1
2,713,690	-				-0.5
2,713,704	-				+0.1
2,713,745	-				+0.6
2,713,759	-				-1.4
2,713,771	+				-1.8
2,713,820	+				+1.4
2,713,820	+				+0.1
2,713,830	+				+2.1
2,713,830	+				-0.9
2,713,830	+				-0.5
2,713,831	+				+1.5
2,713,838	-				-2.5
2,713,838	-				+3.0
2,713,838	-				-0.2
2,713,849	-				-0.5
2,713,900	+				-2.9
2,713,908	-				-0.0
2,713,908	-				+0.0
2,713,908	-				-0.3
2,713,908	-				+0.3
2,713,908	-				-0.8
2,713,942	-				-0.2
2,714,084	+		Dshi_2551	0.10	+0.1
2,714,179	-		Dshi_2551	0.16	-0.4
2,714,247	-		Dshi_2551	0.21	-1.5
2,714,316	-		Dshi_2551	0.25	+0.4
2,714,410	+		Dshi_2551	0.31	-0.5
2,714,444	+		Dshi_2551	0.34	+0.6
2,714,487	+		Dshi_2551	0.36	+0.2
2,714,559	+		Dshi_2551	0.41	-1.7
2,714,591	+		Dshi_2551	0.43	-1.5
2,714,712	+		Dshi_2551	0.51	-1.4
2,714,866	-		Dshi_2551	0.61	-0.6