Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1059 and Dshi_1060 are separated by 16 nucleotides Dshi_1060 and Dshi_1061 are separated by 171 nucleotides
Dshi_1059: Dshi_1059 - hypothetical protein (RefSeq), at 1,093,034 to 1,094,338
_1059
Dshi_1060: Dshi_1060 - hypothetical protein (RefSeq), at 1,094,355 to 1,095,233
_1060
Dshi_1061: Dshi_1061 - hypothetical protein (RefSeq), at 1,095,405 to 1,096,250
_1061
Position (kb)
1094
1095
1096 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1093.377 kb on - strand, within Dshi_1059 at 1093.403 kb on - strand, within Dshi_1059 at 1093.411 kb on + strand, within Dshi_1059 at 1093.471 kb on - strand, within Dshi_1059 at 1093.539 kb on - strand, within Dshi_1059 at 1093.539 kb on - strand, within Dshi_1059 at 1093.822 kb on - strand, within Dshi_1059 at 1093.845 kb on + strand, within Dshi_1059 at 1093.891 kb on - strand, within Dshi_1059 at 1093.908 kb on - strand, within Dshi_1059 at 1093.988 kb on - strand, within Dshi_1059 at 1094.000 kb on - strand, within Dshi_1059 at 1094.271 kb on + strand at 1094.505 kb on + strand, within Dshi_1060 at 1094.667 kb on - strand, within Dshi_1060 at 1094.708 kb on - strand, within Dshi_1060 at 1095.034 kb on - strand, within Dshi_1060 at 1095.039 kb on + strand, within Dshi_1060 at 1095.076 kb on + strand, within Dshi_1060 at 1095.084 kb on - strand, within Dshi_1060 at 1095.095 kb on + strand, within Dshi_1060 at 1095.103 kb on - strand, within Dshi_1060 at 1095.215 kb on + strand at 1095.249 kb on - strand at 1095.267 kb on - strand at 1095.403 kb on + strand at 1095.457 kb on + strand at 1095.490 kb on + strand, within Dshi_1061 at 1095.984 kb on + strand, within Dshi_1061 at 1096.083 kb on + strand, within Dshi_1061 at 1096.140 kb on - strand, within Dshi_1061 at 1096.190 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 1,093,377 - Dshi_1059 0.26 -0.6 1,093,403 - Dshi_1059 0.28 +0.3 1,093,411 + Dshi_1059 0.29 -3.2 1,093,471 - Dshi_1059 0.33 +2.1 1,093,539 - Dshi_1059 0.39 -1.1 1,093,539 - Dshi_1059 0.39 -0.9 1,093,822 - Dshi_1059 0.60 -0.5 1,093,845 + Dshi_1059 0.62 -1.5 1,093,891 - Dshi_1059 0.66 +3.1 1,093,908 - Dshi_1059 0.67 -0.9 1,093,988 - Dshi_1059 0.73 -0.9 1,094,000 - Dshi_1059 0.74 +0.1 1,094,271 + +0.1 1,094,505 + Dshi_1060 0.17 -2.0 1,094,667 - Dshi_1060 0.35 +2.4 1,094,708 - Dshi_1060 0.40 +0.3 1,095,034 - Dshi_1060 0.77 +2.1 1,095,039 + Dshi_1060 0.78 -1.5 1,095,076 + Dshi_1060 0.82 -0.6 1,095,084 - Dshi_1060 0.83 -2.2 1,095,095 + Dshi_1060 0.84 -2.5 1,095,103 - Dshi_1060 0.85 +2.4 1,095,215 + -0.1 1,095,249 - +1.7 1,095,267 - -0.1 1,095,403 + -0.9 1,095,457 + -1.2 1,095,490 + Dshi_1061 0.10 -1.5 1,095,984 + Dshi_1061 0.68 -2.2 1,096,083 + Dshi_1061 0.80 -0.9 1,096,140 - Dshi_1061 0.87 -2.0 1,096,190 - +0.1
Or see this region's nucleotide sequence