Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0951

Experiment: m.b. copper (II) chloride 0.64 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_0949 and Dshi_0950 are separated by 109 nucleotidesDshi_0950 and Dshi_0951 are separated by 209 nucleotidesDshi_0951 and Dshi_0952 are separated by 493 nucleotides Dshi_0949: Dshi_0949 - hypothetical protein (RefSeq), at 973,840 to 974,457 _0949 Dshi_0950: Dshi_0950 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 (RefSeq), at 974,567 to 975,202 _0950 Dshi_0951: Dshi_0951 - hypothetical protein (RefSeq), at 975,412 to 975,882 _0951 Dshi_0952: Dshi_0952 - tryptophan synthase, alpha subunit (RefSeq), at 976,376 to 977,194 _0952 Position (kb) 975 976Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 974.413 kb on + strandat 974.439 kb on - strandat 975.219 kb on - strandat 976.340 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM
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974,413 + -0.8
974,439 - -4.1
975,219 - -1.0
976,340 - +1.2

Or see this region's nucleotide sequence