Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0255 and Dshi_0256 are separated by 78 nucleotides Dshi_0256 and Dshi_0257 are separated by 59 nucleotides Dshi_0257 and Dshi_0258 are separated by 194 nucleotides Dshi_0258 and Dshi_0259 are separated by 201 nucleotides
Dshi_0255: Dshi_0255 - protein of unknown function DUF1013 (RefSeq), at 253,588 to 254,340
_0255
Dshi_0256: Dshi_0256 - hypothetical protein (RefSeq), at 254,419 to 254,667
_0256
Dshi_0257: Dshi_0257 - peptidase S8 and S53 subtilisin kexin sedolisin (RefSeq), at 254,727 to 256,076
_0257
Dshi_0258: Dshi_0258 - preprotein translocase, SecE subunit (RefSeq), at 256,271 to 256,471
_0258
Dshi_0259: Dshi_0259 - NusG antitermination factor (RefSeq), at 256,673 to 257,206
_0259
Position (kb) 254
255
256
257 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 254.171 kb on + strand, within Dshi_0255 at 254.320 kb on - strand at 254.413 kb on - strand at 254.687 kb on - strand at 254.799 kb on - strand at 254.873 kb on - strand, within Dshi_0257 at 254.955 kb on + strand, within Dshi_0257 at 255.010 kb on - strand, within Dshi_0257 at 255.017 kb on - strand, within Dshi_0257 at 255.088 kb on + strand, within Dshi_0257 at 255.231 kb on - strand, within Dshi_0257 at 255.244 kb on + strand, within Dshi_0257 at 255.306 kb on + strand, within Dshi_0257 at 255.357 kb on - strand, within Dshi_0257 at 255.497 kb on + strand, within Dshi_0257 at 255.531 kb on - strand, within Dshi_0257 at 255.631 kb on + strand, within Dshi_0257 at 255.771 kb on - strand, within Dshi_0257 at 255.785 kb on + strand, within Dshi_0257 at 255.838 kb on - strand, within Dshi_0257 at 255.849 kb on - strand, within Dshi_0257 at 255.877 kb on + strand, within Dshi_0257 at 255.890 kb on + strand, within Dshi_0257 at 255.914 kb on - strand, within Dshi_0257 at 255.952 kb on + strand at 255.960 kb on - strand at 255.960 kb on - strand at 255.960 kb on - strand at 255.976 kb on - strand at 256.021 kb on + strand at 256.058 kb on + strand at 256.058 kb on - strand at 256.058 kb on - strand at 256.066 kb on + strand at 256.069 kb on - strand at 256.120 kb on + strand at 256.125 kb on + strand at 256.125 kb on + strand at 256.133 kb on - strand at 256.137 kb on + strand at 256.138 kb on - strand at 256.166 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.183 kb on + strand at 256.191 kb on - strand at 256.191 kb on - strand at 256.191 kb on - strand at 256.191 kb on - strand at 256.191 kb on - strand at 256.192 kb on - strand at 256.470 kb on + strand at 256.510 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 254,171 + Dshi_0255 0.77 -2.7 254,320 - -1.7 254,413 - -3.5 254,687 - +3.1 254,799 - -2.5 254,873 - Dshi_0257 0.11 +1.9 254,955 + Dshi_0257 0.17 -1.3 255,010 - Dshi_0257 0.21 -1.1 255,017 - Dshi_0257 0.21 -1.3 255,088 + Dshi_0257 0.27 -1.1 255,231 - Dshi_0257 0.37 -0.1 255,244 + Dshi_0257 0.38 +0.3 255,306 + Dshi_0257 0.43 +1.9 255,357 - Dshi_0257 0.47 -0.1 255,497 + Dshi_0257 0.57 -1.6 255,531 - Dshi_0257 0.60 +1.3 255,631 + Dshi_0257 0.67 +0.4 255,771 - Dshi_0257 0.77 -4.2 255,785 + Dshi_0257 0.78 -0.7 255,838 - Dshi_0257 0.82 -0.4 255,849 - Dshi_0257 0.83 +0.3 255,877 + Dshi_0257 0.85 -0.2 255,890 + Dshi_0257 0.86 -1.3 255,914 - Dshi_0257 0.88 +0.3 255,952 + -0.5 255,960 - +3.9 255,960 - -0.9 255,960 - +3.6 255,976 - +2.1 256,021 + +0.4 256,058 + -0.9 256,058 - +1.9 256,058 - -1.1 256,066 + -1.3 256,069 - -1.1 256,120 + -0.6 256,125 + -1.4 256,125 + -0.7 256,133 - +0.5 256,137 + -1.0 256,138 - -0.9 256,166 + -0.3 256,183 + -2.2 256,183 + +0.8 256,183 + +3.1 256,183 + +0.4 256,183 + +0.2 256,183 + +0.2 256,183 + +2.6 256,183 + +0.0 256,191 - -1.0 256,191 - -1.3 256,191 - +0.5 256,191 - -1.7 256,191 - -2.7 256,192 - -2.5 256,470 + +3.1 256,510 - -1.0
Or see this region's nucleotide sequence