Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1476

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_1475 and Shewana3_1476 are separated by 430 nucleotidesShewana3_1476 and Shewana3_1477 are separated by 2 nucleotides Shewana3_1475: Shewana3_1475 - 3-oxoacyl-[acyl-carrier-protein] synthase I (RefSeq), at 1,714,724 to 1,715,959 _1475 Shewana3_1476: Shewana3_1476 - D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region (RefSeq), at 1,716,390 to 1,717,520 _1476 Shewana3_1477: Shewana3_1477 - aspartate semialdehyde dehydrogenase (RefSeq), at 1,717,523 to 1,718,539 _1477 Position (kb) 1716 1717 1718Strain fitness (log2 ratio) -2 -1 0 1at 1716.179 kb on - strandat 1716.325 kb on - strandat 1717.192 kb on + strand, within Shewana3_1476

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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1,716,179 - -1.3
1,716,325 - -1.8
1,717,192 + Shewana3_1476 0.71 -2.0

Or see this region's nucleotide sequence