Strain Fitness in Shewanella amazonensis SB2B around Sama_3571

Experiment: acetate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate
4,205,480	+		Sama_3569	0.84	-1.3
4,205,481	-		Sama_3569	0.84	+0.6
4,205,537	+		Sama_3569	0.87	+1.5
4,205,537	+		Sama_3569	0.87	-0.8
4,205,537	+		Sama_3569	0.87	+0.5
4,205,538	-		Sama_3569	0.87	-0.6
4,205,538	-		Sama_3569	0.87	-1.3
4,205,538	-		Sama_3569	0.87	-0.0
4,205,538	-		Sama_3569	0.87	+0.5
4,205,548	+		Sama_3569	0.87	+0.0
4,205,549	-		Sama_3569	0.88	-0.2
4,205,549	-		Sama_3569	0.88	+0.2
4,205,570	+		Sama_3569	0.88	-0.5
4,205,570	+		Sama_3569	0.88	+0.1
4,205,570	+		Sama_3569	0.88	-0.7
4,205,570	+		Sama_3569	0.88	+0.1
4,205,571	-		Sama_3569	0.89	+1.0
4,205,571	-		Sama_3569	0.89	-0.7
4,205,679	+				-0.7
4,205,711	+				-0.3
4,205,711	+				+0.6
4,205,711	+				-0.7
4,205,711	+				-0.1
4,205,711	+				+0.4
4,205,711	+				-0.2
4,205,712	-				-0.0
4,205,712	-				-1.7
4,205,712	-				+0.7
4,205,777	+				-0.0
4,205,777	+				+0.5
4,205,777	+				+0.1
4,205,778	-				-0.9
4,205,778	-				-2.0
4,205,778	-				+0.1
4,205,779	+				+1.3
4,205,779	+				+0.5
4,205,779	+				-1.2
4,205,779	+				-0.0
4,205,819	+				+0.2
4,205,820	-				+0.1
4,205,820	-				-0.3
4,205,820	-				+0.8
4,205,869	+				+1.2
4,205,869	+				+0.1
4,205,886	+				-0.3
4,205,886	+				+0.1
4,205,886	+				+0.3
4,205,887	-				-0.4
4,205,903	-				-1.0
4,206,010	-		Sama_3570	0.12	+0.3
4,206,010	-		Sama_3570	0.12	-0.2
4,206,032	+		Sama_3570	0.18	-1.0
4,206,038	+		Sama_3570	0.19	+0.5
4,206,038	+		Sama_3570	0.19	+1.3
4,206,038	+		Sama_3570	0.19	-1.2
4,206,039	-		Sama_3570	0.19	+0.1
4,206,117	+		Sama_3570	0.39	+0.6
4,206,117	+		Sama_3570	0.39	-0.1
4,206,117	+		Sama_3570	0.39	-1.2
4,206,118	-		Sama_3570	0.39	-0.0
4,206,118	-		Sama_3570	0.39	-0.0
4,206,161	+		Sama_3570	0.50	-0.8
4,206,161	+		Sama_3570	0.50	+1.3
4,206,162	-		Sama_3570	0.50	-1.5
4,206,162	-		Sama_3570	0.50	-0.3
4,206,162	-		Sama_3570	0.50	-0.9
4,206,162	-		Sama_3570	0.50	-0.5
4,206,164	+		Sama_3570	0.51	-0.4
4,206,164	+		Sama_3570	0.51	+0.1
4,206,164	+		Sama_3570	0.51	-1.8
4,206,164	+		Sama_3570	0.51	-0.3
4,206,164	+		Sama_3570	0.51	+1.0
4,206,164	+		Sama_3570	0.51	+0.1
4,206,165	-		Sama_3570	0.51	-0.5
4,206,165	-		Sama_3570	0.51	-1.1
4,206,190	-		Sama_3570	0.57	+0.4
4,206,190	-		Sama_3570	0.57	-1.4
4,206,190	-		Sama_3570	0.57	+0.1
4,206,294	+		Sama_3570	0.83	-1.0
4,206,294	+		Sama_3570	0.83	+1.3
4,206,294	+		Sama_3570	0.83	-0.8
4,206,295	-		Sama_3570	0.83	+2.7
4,206,295	-		Sama_3570	0.83	+0.1
4,206,301	-		Sama_3570	0.85	+0.8
4,206,301	-		Sama_3570	0.85	-0.3
4,206,360	+				-0.1
4,206,360	+				+0.1
4,206,360	+				+0.7
4,206,361	-				-0.9
4,206,361	-				+0.8
4,206,391	+				+0.9
4,206,392	-				+0.3
4,206,393	+				-0.0
4,206,406	+				+0.5
4,206,406	+				-0.1
4,206,406	+				-0.7
4,206,406	+				+1.9
4,206,407	-				-1.1
4,206,407	-				-1.1
4,206,407	-				+0.0
4,206,408	+				-0.4
4,206,409	-				-0.7
4,206,409	-				-0.1
4,206,419	+				-0.5
4,206,420	-				+0.5
4,206,420	-				-0.7
4,206,463	+				+0.6
4,206,468	+				-1.0
4,206,468	+				-0.3
4,206,468	+				+0.3
4,206,469	-				+0.3
4,206,469	-				-0.3
4,206,469	-				-0.0
4,206,469	-				+0.7
4,206,469	-				+0.0
4,206,486	+				-0.3
4,206,486	+				-0.7
4,206,486	+				+0.5
4,206,486	+				+0.6
4,206,486	+				-0.3
4,206,487	-				-0.9
4,206,487	-				+0.0
4,206,487	-				+0.6
4,206,487	-				-0.3
4,206,487	-				-0.8
4,206,487	-				-0.3
4,206,510	+				-0.0
4,206,510	+				-0.5
4,206,510	+				-1.6
4,206,510	+				-0.1
4,206,510	+				+0.4
4,206,510	+				+1.1
4,206,511	-				+0.1
4,206,511	-				+0.9
4,206,511	-				+1.3
4,206,511	-				+0.5
4,206,511	-				-0.9
4,206,514	+				-0.2
4,206,514	+				+0.6
4,206,514	+				+0.9
4,206,514	+				-0.1
4,206,514	+				-1.5
4,206,514	+				+0.3
4,206,515	-				-0.7
4,206,519	+				-0.2
4,206,520	-				-0.0
4,206,520	-				+0.1
4,206,520	-				+0.5
4,206,520	-				+1.7
4,206,520	-				+0.0
4,206,520	-				-1.1
4,206,542	+				+1.0
4,206,542	+				+1.0
4,206,547	+				+1.2
4,206,547	+				-0.3
4,206,553	+				+1.0
4,206,553	+				-0.0
4,206,553	+				+1.1
4,206,554	-				-0.8
4,206,554	-				+0.2
4,206,706	-		Sama_3571	0.13	+0.1
4,206,706	-		Sama_3571	0.13	-0.9
4,206,747	+		Sama_3571	0.15	-0.4
4,206,747	+		Sama_3571	0.15	+1.1
4,206,748	-		Sama_3571	0.15	-0.3
4,206,748	-		Sama_3571	0.15	+1.7
4,206,774	+		Sama_3571	0.17	-0.0
4,206,774	+		Sama_3571	0.17	-0.0
4,206,775	-		Sama_3571	0.17	-2.3
4,206,775	-		Sama_3571	0.17	+0.3
4,206,775	-		Sama_3571	0.17	+0.2
4,206,775	-		Sama_3571	0.17	+0.5
4,206,775	-		Sama_3571	0.17	+0.4
4,206,775	-		Sama_3571	0.17	-2.2
4,206,775	-		Sama_3571	0.17	+1.3
4,206,775	-		Sama_3571	0.17	-1.0
4,206,775	-		Sama_3571	0.17	-0.9
4,206,809	+		Sama_3571	0.19	+1.3
4,206,810	-		Sama_3571	0.19	+1.3
4,206,810	-		Sama_3571	0.19	+0.1
4,206,810	-		Sama_3571	0.19	-0.3
4,206,810	-		Sama_3571	0.19	-0.4
4,206,810	-		Sama_3571	0.19	+0.8
4,206,810	-		Sama_3571	0.19	-0.0
4,206,810	-		Sama_3571	0.19	-0.9
4,206,811	+		Sama_3571	0.19	-0.7
4,206,811	+		Sama_3571	0.19	-0.3
4,206,812	-		Sama_3571	0.19	-1.0
4,206,856	+		Sama_3571	0.21	-0.7
4,206,857	-		Sama_3571	0.21	-1.0
4,206,857	-		Sama_3571	0.21	-0.0
4,206,858	+		Sama_3571	0.21	-0.2
4,206,858	+		Sama_3571	0.21	+0.3
4,206,858	+		Sama_3571	0.21	-1.0
4,206,858	+		Sama_3571	0.21	-0.3
4,206,858	+		Sama_3571	0.21	+0.5
4,206,858	+		Sama_3571	0.21	-0.1
4,206,858	+		Sama_3571	0.21	-1.3
4,206,858	+		Sama_3571	0.21	-0.3
4,206,859	-		Sama_3571	0.21	-0.0
4,206,859	-		Sama_3571	0.21	-0.4
4,206,859	-		Sama_3571	0.21	-0.3
4,206,859	-		Sama_3571	0.21	+0.1
4,206,859	-		Sama_3571	0.21	+0.6
4,206,868	+		Sama_3571	0.22	+0.2
4,206,869	-		Sama_3571	0.22	+0.1
4,206,869	-		Sama_3571	0.22	+0.0
4,206,904	+		Sama_3571	0.24	-0.6
4,206,905	-		Sama_3571	0.24	-1.4
4,206,905	-		Sama_3571	0.24	+1.3
4,206,905	-		Sama_3571	0.24	-0.1
4,206,949	+		Sama_3571	0.26	-0.7
4,206,950	-		Sama_3571	0.26	+0.5
4,206,979	+		Sama_3571	0.28	-0.2
4,206,979	+		Sama_3571	0.28	-0.0
4,206,979	+		Sama_3571	0.28	+0.8
4,206,980	-		Sama_3571	0.28	-0.2
4,206,996	+		Sama_3571	0.29	-1.3
4,206,996	+		Sama_3571	0.29	+0.5
4,206,996	+		Sama_3571	0.29	+0.2
4,206,997	-		Sama_3571	0.29	+0.4
4,206,997	-		Sama_3571	0.29	-0.7
4,206,997	-		Sama_3571	0.29	+0.6
4,206,997	-		Sama_3571	0.29	-0.1
4,206,997	-		Sama_3571	0.29	-0.3
4,206,997	-		Sama_3571	0.29	-2.3
4,206,997	-		Sama_3571	0.29	-0.6
4,206,997	-		Sama_3571	0.29	-0.6
4,206,999	+		Sama_3571	0.29	-0.1
4,207,084	+		Sama_3571	0.34	+0.4
4,207,085	-		Sama_3571	0.34	-1.5
4,207,085	-		Sama_3571	0.34	+0.8
4,207,085	-		Sama_3571	0.34	+1.4
4,207,085	-		Sama_3571	0.34	-0.4
4,207,111	+		Sama_3571	0.35	-1.3
4,207,112	-		Sama_3571	0.35	+0.7
4,207,150	-		Sama_3571	0.38	+0.2
4,207,150	-		Sama_3571	0.38	-0.2
4,207,150	-		Sama_3571	0.38	-0.1
4,207,157	+		Sama_3571	0.38	+0.8
4,207,158	-		Sama_3571	0.38	+1.1
4,207,158	-		Sama_3571	0.38	+2.1
4,207,158	-		Sama_3571	0.38	-0.8
4,207,158	-		Sama_3571	0.38	-0.5
4,207,158	-		Sama_3571	0.38	-0.7
4,207,173	-		Sama_3571	0.39	+0.2
4,207,229	-		Sama_3571	0.42	-1.5
4,207,279	+		Sama_3571	0.45	+0.1
4,207,388	-		Sama_3571	0.51	-1.7
4,207,488	-		Sama_3571	0.56	-0.3
4,207,521	+		Sama_3571	0.58	+0.2
4,207,521	+		Sama_3571	0.58	-0.7
4,207,521	+		Sama_3571	0.58	-0.7
4,207,522	-		Sama_3571	0.58	+2.9
4,207,522	-		Sama_3571	0.58	+0.3
4,207,522	-		Sama_3571	0.58	-0.3
4,207,551	+		Sama_3571	0.60	-0.2
4,207,552	-		Sama_3571	0.60	-0.2
4,207,552	-		Sama_3571	0.60	+0.7
4,207,552	-		Sama_3571	0.60	-0.8
4,207,552	-		Sama_3571	0.60	+2.3
4,207,658	+		Sama_3571	0.66	-0.6
4,207,659	-		Sama_3571	0.66	-0.9
4,207,666	+		Sama_3571	0.66	-1.2
4,207,667	-		Sama_3571	0.66	-0.4
4,207,673	+		Sama_3571	0.67	-0.4
4,207,674	-		Sama_3571	0.67	+0.4
4,207,713	+		Sama_3571	0.69	+0.7
4,207,713	+		Sama_3571	0.69	+0.1
4,207,713	+		Sama_3571	0.69	+0.2
4,207,713	+		Sama_3571	0.69	-0.3
4,207,713	+		Sama_3571	0.69	+0.8
4,207,714	-		Sama_3571	0.69	+0.8
4,207,714	-		Sama_3571	0.69	-1.4
4,207,714	-		Sama_3571	0.69	-0.0
4,207,717	+		Sama_3571	0.69	+0.2
4,207,717	+		Sama_3571	0.69	+0.8
4,207,717	+		Sama_3571	0.69	+0.4
4,207,717	+		Sama_3571	0.69	+0.4
4,207,718	-		Sama_3571	0.69	-0.3
4,207,718	-		Sama_3571	0.69	-0.4
4,207,718	-		Sama_3571	0.69	+0.7
4,207,718	-		Sama_3571	0.69	-0.3
4,207,718	-		Sama_3571	0.69	+0.1
4,207,718	-		Sama_3571	0.69	-0.6
4,207,718	-		Sama_3571	0.69	+0.4
4,207,718	-		Sama_3571	0.69	+0.2
4,207,718	-		Sama_3571	0.69	+0.8
4,207,870	+		Sama_3571	0.78	+0.3
4,207,870	+		Sama_3571	0.78	-0.2
4,207,870	+		Sama_3571	0.78	+0.5
4,207,870	+		Sama_3571	0.78	+0.7
4,207,870	+		Sama_3571	0.78	-0.2
4,207,870	+		Sama_3571	0.78	-0.2
4,207,870	+		Sama_3571	0.78	-0.6
4,207,870	+		Sama_3571	0.78	-0.4
4,207,871	-		Sama_3571	0.78	-1.2
4,207,871	-		Sama_3571	0.78	-0.4
4,207,871	-		Sama_3571	0.78	-0.7
4,207,871	-		Sama_3571	0.78	-1.5
4,207,871	-		Sama_3571	0.78	-0.9
4,207,871	-		Sama_3571	0.78	-0.9
4,207,911	+		Sama_3571	0.80	+0.1
4,207,912	-		Sama_3571	0.80	+0.1
4,207,912	-		Sama_3571	0.80	-0.9
4,207,961	+		Sama_3571	0.83	-0.5
4,207,961	+		Sama_3571	0.83	-0.1
4,207,961	+		Sama_3571	0.83	+0.5
4,207,961	+		Sama_3571	0.83	+0.1
4,207,962	-		Sama_3571	0.83	-0.8
4,207,962	-		Sama_3571	0.83	+0.1
4,207,962	-		Sama_3571	0.83	+0.1
4,207,962	-		Sama_3571	0.83	-0.6
4,207,962	-		Sama_3571	0.83	-0.5
4,207,962	-		Sama_3571	0.83	-0.7
4,207,965	+		Sama_3571	0.83	+1.7
4,207,965	+		Sama_3571	0.83	+0.2
4,207,965	+		Sama_3571	0.83	+0.4
4,207,965	+		Sama_3571	0.83	+0.3
4,207,965	+		Sama_3571	0.83	+0.5
4,207,965	+		Sama_3571	0.83	+0.7
4,207,965	+		Sama_3571	0.83	-0.5
4,207,965	+		Sama_3571	0.83	-0.4
4,207,966	-		Sama_3571	0.83	-0.5
4,207,966	-		Sama_3571	0.83	-0.3
4,207,966	-		Sama_3571	0.83	+0.4
4,207,966	-		Sama_3571	0.83	+0.1
4,207,966	-		Sama_3571	0.83	+0.3
4,207,966	-		Sama_3571	0.83	-0.5
4,207,966	-		Sama_3571	0.83	-0.6
4,207,966	-		Sama_3571	0.83	-0.2
4,207,966	-		Sama_3571	0.83	-0.0
4,207,966	-		Sama_3571	0.83	+1.3
4,207,966	-		Sama_3571	0.83	+0.7
4,207,984	+		Sama_3571	0.84	+0.2
4,207,985	-		Sama_3571	0.84	+0.4
4,207,995	+		Sama_3571	0.85	-1.2
4,207,996	-		Sama_3571	0.85	+1.0
4,208,071	+		Sama_3571	0.89	+0.4
4,208,071	+		Sama_3571	0.89	-3.2
4,208,071	+		Sama_3571	0.89	+2.0
4,208,071	+		Sama_3571	0.89	-0.9
4,208,071	+		Sama_3571	0.89	-0.3
4,208,071	+		Sama_3571	0.89	-0.4
4,208,072	-		Sama_3571	0.89	-0.8
4,208,072	-		Sama_3571	0.89	+1.1
4,208,072	-		Sama_3571	0.89	+2.0
4,208,072	-		Sama_3571	0.89	+0.4
4,208,072	-		Sama_3571	0.89	-0.4
4,208,072	-		Sama_3571	0.89	-0.0
4,208,072	-		Sama_3571	0.89	+0.7
4,208,274	+				+0.1
4,208,274	+				-0.9
4,208,274	+				-0.7
4,208,274	+				-1.0
4,208,274	+				+1.7
4,208,275	-				+0.3
4,208,275	-				+1.1
4,208,275	-				-0.0
4,208,285	+				+1.5
4,208,310	+				+1.3
4,208,310	+				-2.0
4,208,311	-				-1.8
4,208,311	-				-0.2
4,208,311	-				-0.2
4,208,311	-				+0.2
4,208,311	-				+0.0
4,208,311	-				+0.1
4,208,315	+				+1.0
4,208,315	+				+0.7
4,208,315	+				+0.0
4,208,367	-				-0.2
4,208,367	-				+0.8
4,208,367	-				+1.3
4,208,373	+				+0.4
4,208,373	+				+1.3
4,208,373	+				-1.4
4,208,373	+				+0.7
4,208,373	+				+0.1
4,208,373	+				-0.5
4,208,373	+				+0.6
4,208,374	-				+0.1
4,208,374	-				-0.8
4,208,374	-				-0.2
4,208,374	-				-1.3
4,208,374	-				-0.6
4,208,374	-				+0.1
4,208,374	-				-0.5
4,208,374	-				+0.7
4,208,374	-				+0.7
4,208,374	-				-1.1
4,208,374	-				+0.3
4,208,374	-				-0.3
4,208,376	+				-0.0
4,208,376	+				-0.6
4,208,376	+				+1.0
4,208,377	-				-0.0
4,208,377	-				-0.2
4,208,377	-				-2.2
4,208,418	+				+0.2
4,208,446	-				+0.9
4,208,450	+				+1.3
4,208,450	+				-0.9
4,208,450	+				-0.5
4,208,450	+				+0.0
4,208,450	+				+0.3
4,208,451	-				-0.4
4,208,451	-				+0.1
4,208,451	-				+0.9
4,208,451	-				-0.8
4,208,451	-				-0.0
4,208,497	-				+1.4
4,208,497	-				+0.4
4,208,497	-				-0.1
4,208,500	+				+0.5
4,208,538	+				-0.7
4,208,539	-				-1.0
4,208,542	+				-0.9
4,208,542	+				-1.5
4,208,542	+				-0.8
4,208,542	+				+1.9
4,208,542	+				-0.1
4,208,543	-				-0.0
4,208,543	-				-0.7
4,208,543	-				+0.4
4,208,543	-				+0.3
4,208,543	-				+0.3
4,208,543	-				-0.0
4,208,543	-				-0.4
4,208,594	-		Sama_3572	0.12	-1.0
4,208,619	+		Sama_3572	0.14	-0.4
4,208,619	+		Sama_3572	0.14	+0.4
4,208,620	-		Sama_3572	0.14	+0.5
4,208,620	-		Sama_3572	0.14	+1.1
4,208,623	-		Sama_3572	0.14	-0.4
4,208,623	-		Sama_3572	0.14	+1.0
4,208,623	-		Sama_3572	0.14	-0.9
4,208,690	-		Sama_3572	0.19	+1.0
4,208,734	+		Sama_3572	0.23	-0.6
4,208,734	+		Sama_3572	0.23	+1.1
4,208,734	+		Sama_3572	0.23	+0.2
4,208,735	-		Sama_3572	0.23	+1.3
4,208,735	-		Sama_3572	0.23	+0.5
4,208,798	+		Sama_3572	0.28	-0.1
4,208,798	+		Sama_3572	0.28	-1.3
4,208,798	+		Sama_3572	0.28	-0.2
4,208,799	-		Sama_3572	0.28	+0.9
4,208,801	+		Sama_3572	0.28	-1.2
4,208,802	-		Sama_3572	0.28	-0.5
4,208,956	+		Sama_3572	0.41	+1.1
4,208,956	+		Sama_3572	0.41	-2.0
4,208,957	-		Sama_3572	0.41	+0.4
4,208,961	+		Sama_3572	0.41	+1.0
4,208,961	+		Sama_3572	0.41	-1.3
4,208,986	+		Sama_3572	0.43	+0.7
4,208,986	+		Sama_3572	0.43	+0.6
4,208,987	-		Sama_3572	0.43	-0.7
4,208,999	-		Sama_3572	0.44	+0.1
4,208,999	-		Sama_3572	0.44	-0.8
4,209,004	+		Sama_3572	0.45	+0.0
4,209,004	+		Sama_3572	0.45	+0.6
4,209,005	-		Sama_3572	0.45	-1.1
4,209,005	-		Sama_3572	0.45	+0.2
4,209,016	-		Sama_3572	0.46	-0.3
4,209,018	+		Sama_3572	0.46	+0.5
4,209,019	-		Sama_3572	0.46	-0.0
4,209,035	+		Sama_3572	0.47	+0.7
4,209,121	-		Sama_3572	0.54	+0.7
4,209,126	+		Sama_3572	0.55	-2.7
4,209,126	+		Sama_3572	0.55	-0.6
4,209,127	-		Sama_3572	0.55	-0.9
4,209,131	+		Sama_3572	0.55	+1.1
4,209,131	+		Sama_3572	0.55	-0.6
4,209,132	-		Sama_3572	0.55	-0.1
4,209,132	-		Sama_3572	0.55	+0.7
4,209,132	-		Sama_3572	0.55	+0.0
4,209,132	-		Sama_3572	0.55	-0.6
4,209,162	+		Sama_3572	0.57	+0.6
4,209,187	+		Sama_3572	0.59	+1.8
4,209,256	-		Sama_3572	0.65	+0.3
4,209,265	+		Sama_3572	0.66	-0.2
4,209,266	-		Sama_3572	0.66	+0.3