Strain Fitness in Shewanella amazonensis SB2B around Sama_3194

Experiment: acetate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate
3,785,804	-				-1.0
3,785,804	-				-1.4
3,785,804	-				-0.2
3,785,807	-				-1.0
3,785,807	-				-0.3
3,785,807	-				+0.2
3,785,809	-				+0.9
3,785,830	+				-1.0
3,785,830	+				+0.0
3,785,831	-				-0.2
3,785,869	-		Sama_3192	0.14	-0.1
3,785,981	-		Sama_3192	0.44	+0.3
3,785,981	-		Sama_3192	0.44	-0.8
3,785,986	+		Sama_3192	0.45	+0.5
3,785,986	+		Sama_3192	0.45	+4.2
3,785,986	+		Sama_3192	0.45	+0.8
3,785,986	+		Sama_3192	0.45	+1.4
3,785,986	+		Sama_3192	0.45	+0.6
3,785,987	-		Sama_3192	0.45	-0.6
3,785,987	-		Sama_3192	0.45	-0.1
3,785,987	-		Sama_3192	0.45	+0.1
3,785,987	-		Sama_3192	0.45	+0.4
3,785,987	-		Sama_3192	0.45	-0.2
3,785,987	-		Sama_3192	0.45	+0.4
3,785,987	-		Sama_3192	0.45	-0.1
3,786,048	+		Sama_3192	0.62	+0.1
3,786,048	+		Sama_3192	0.62	+0.5
3,786,049	-		Sama_3192	0.62	-1.1
3,786,050	+		Sama_3192	0.62	-0.6
3,786,050	+		Sama_3192	0.62	-1.6
3,786,050	+		Sama_3192	0.62	-0.0
3,786,050	+		Sama_3192	0.62	+0.5
3,786,050	+		Sama_3192	0.62	-2.0
3,786,050	+		Sama_3192	0.62	-0.7
3,786,050	+		Sama_3192	0.62	-0.9
3,786,051	-		Sama_3192	0.63	-0.1
3,786,051	-		Sama_3192	0.63	+0.6
3,786,051	-		Sama_3192	0.63	+1.7
3,786,051	-		Sama_3192	0.63	+0.5
3,786,051	-		Sama_3192	0.63	-2.2
3,786,080	+		Sama_3192	0.70	-0.5
3,786,081	-		Sama_3192	0.71	+0.8
3,786,081	-		Sama_3192	0.71	-1.2
3,786,081	-		Sama_3192	0.71	-0.6
3,786,113	+		Sama_3192	0.79	-1.2
3,786,154	+				-0.5
3,786,154	+				-0.6
3,786,155	-				-1.2
3,786,155	-				-0.0
3,786,162	+				-0.3
3,786,184	+				-0.3
3,786,184	+				+0.5
3,786,184	+				+0.1
3,786,184	+				-1.2
3,786,185	-				+1.1
3,786,185	-				-0.8
3,786,185	-				+0.1
3,786,189	+				+1.0
3,786,189	+				-0.8
3,786,189	+				+0.6
3,786,189	+				+0.1
3,786,189	+				-0.6
3,786,189	+				+0.5
3,786,189	+				+1.0
3,786,189	+				-0.0
3,786,189	+				-0.1
3,786,190	-				-1.6
3,786,190	-				-0.1
3,786,190	-				-0.7
3,786,190	-				-0.6
3,786,190	-				-0.4
3,786,190	-				-0.5
3,786,190	-				-0.1
3,786,190	-				+0.2
3,786,190	-				+0.4
3,786,239	+				-0.3
3,786,240	-				-0.4
3,786,240	-				+0.1
3,786,240	-				-0.0
3,786,240	-				+0.2
3,786,262	+				-0.1
3,786,262	+				+0.1
3,786,262	+				+0.0
3,786,263	-				+0.4
3,786,275	-				-1.7
3,786,395	+		Sama_3193	0.28	-1.7
3,786,395	+		Sama_3193	0.28	-0.2
3,786,395	+		Sama_3193	0.28	-0.6
3,786,396	-		Sama_3193	0.28	-0.5
3,786,396	-		Sama_3193	0.28	+0.9
3,786,433	+		Sama_3193	0.37	+2.7
3,786,434	-		Sama_3193	0.37	+0.5
3,786,435	+		Sama_3193	0.37	-0.5
3,786,492	+		Sama_3193	0.51	-0.1
3,786,552	+		Sama_3193	0.66	-0.5
3,786,553	-		Sama_3193	0.66	-0.1
3,786,553	-		Sama_3193	0.66	+0.1
3,786,553	-		Sama_3193	0.66	-1.0
3,786,553	-		Sama_3193	0.66	-0.3
3,786,582	-		Sama_3193	0.73	-1.4
3,786,594	+		Sama_3193	0.76	+0.7
3,786,594	+		Sama_3193	0.76	-1.2
3,786,595	-		Sama_3193	0.76	-0.8
3,786,688	+				+0.4
3,786,688	+				-0.3
3,786,689	-				+0.3
3,786,714	+				-0.0
3,786,833	-				-0.9
3,786,833	-				-0.5
3,786,862	+		Sama_3194	0.13	+0.5
3,786,888	+		Sama_3194	0.18	-2.2
3,786,888	+		Sama_3194	0.18	-1.9
3,786,889	-		Sama_3194	0.19	-1.5
3,786,965	+		Sama_3194	0.35	-0.5
3,786,965	+		Sama_3194	0.35	+0.1
3,786,965	+		Sama_3194	0.35	-1.2
3,786,965	+		Sama_3194	0.35	-1.5
3,786,965	+		Sama_3194	0.35	-2.0
3,786,966	-		Sama_3194	0.36	-2.2
3,786,966	-		Sama_3194	0.36	-0.5
3,787,007	+		Sama_3194	0.45	-1.5
3,787,008	-		Sama_3194	0.45	-1.2
3,787,031	+		Sama_3194	0.50	-1.5
3,787,032	-		Sama_3194	0.50	-2.3
3,787,032	-		Sama_3194	0.50	-0.5
3,787,032	-		Sama_3194	0.50	+0.1
3,787,032	-		Sama_3194	0.50	-0.5
3,787,032	-		Sama_3194	0.50	-0.5
3,787,032	-		Sama_3194	0.50	-1.5
3,787,034	+		Sama_3194	0.50	-0.9
3,787,035	-		Sama_3194	0.51	-1.2
3,787,159	-		Sama_3194	0.78	-1.2
3,787,209	+		Sama_3194	0.89	+0.1
3,787,303	-		Sama_3195	0.10	+1.1
3,787,392	+		Sama_3195	0.31	-0.7
3,787,481	+		Sama_3195	0.52	-0.8
3,787,627	-		Sama_3195	0.86	-1.5
3,787,697	+				+0.5
3,787,705	+				-0.3
3,787,743	-				+0.4
3,787,785	+				+0.2
3,787,785	+				-0.5
3,787,785	+				+1.7
3,787,786	-				+0.5
3,787,786	-				-2.3
3,787,786	-				-0.4
3,787,786	-				+0.7
3,787,843	+		Sama_3196	0.12	-0.3
3,787,843	+		Sama_3196	0.12	-2.0
3,787,843	+		Sama_3196	0.12	-0.5
3,787,844	-		Sama_3196	0.12	+0.4
3,787,844	-		Sama_3196	0.12	+0.1
3,787,844	-		Sama_3196	0.12	+0.8
3,787,869	+		Sama_3196	0.14	+0.5
3,787,869	+		Sama_3196	0.14	-0.6
3,787,869	+		Sama_3196	0.14	-0.2
3,787,869	+		Sama_3196	0.14	+0.1
3,787,869	+		Sama_3196	0.14	-0.3
3,787,869	+		Sama_3196	0.14	+0.8
3,787,869	+		Sama_3196	0.14	-0.8
3,787,870	-		Sama_3196	0.14	+0.6
3,787,870	-		Sama_3196	0.14	-0.8
3,787,870	-		Sama_3196	0.14	-1.1
3,787,888	+		Sama_3196	0.15	-0.7
3,787,889	-		Sama_3196	0.16	+0.3
3,787,890	+		Sama_3196	0.16	+0.7
3,787,924	+		Sama_3196	0.18	-0.6
3,787,924	+		Sama_3196	0.18	-1.0
3,787,924	+		Sama_3196	0.18	+0.0
3,787,924	+		Sama_3196	0.18	-0.0
3,787,924	+		Sama_3196	0.18	-0.5
3,787,924	+		Sama_3196	0.18	-1.0
3,787,925	-		Sama_3196	0.18	-0.1
3,787,925	-		Sama_3196	0.18	-0.1
3,787,925	-		Sama_3196	0.18	-0.7
3,787,925	-		Sama_3196	0.18	-0.5
3,787,935	+		Sama_3196	0.19	+0.1
3,788,015	+		Sama_3196	0.25	+0.8
3,788,020	+		Sama_3196	0.25	-0.5
3,788,020	+		Sama_3196	0.25	-0.4
3,788,020	+		Sama_3196	0.25	+0.4
3,788,021	-		Sama_3196	0.25	-0.3
3,788,021	-		Sama_3196	0.25	+0.3
3,788,036	+		Sama_3196	0.26	+1.1
3,788,037	-		Sama_3196	0.26	-1.0
3,788,078	+		Sama_3196	0.29	-0.0
3,788,078	+		Sama_3196	0.29	+0.3
3,788,078	+		Sama_3196	0.29	-0.3
3,788,078	+		Sama_3196	0.29	-0.5
3,788,079	-		Sama_3196	0.29	+0.2
3,788,079	-		Sama_3196	0.29	-0.3
3,788,079	-		Sama_3196	0.29	-0.9
3,788,146	+		Sama_3196	0.34	+0.1
3,788,146	+		Sama_3196	0.34	+0.1
3,788,146	+		Sama_3196	0.34	+0.7
3,788,146	+		Sama_3196	0.34	-0.5
3,788,146	+		Sama_3196	0.34	+0.9
3,788,146	+		Sama_3196	0.34	+0.4
3,788,146	+		Sama_3196	0.34	-0.2
3,788,146	+		Sama_3196	0.34	-1.1
3,788,146	+		Sama_3196	0.34	-0.2
3,788,146	+		Sama_3196	0.34	-0.8
3,788,146	+		Sama_3196	0.34	+0.1
3,788,146	+		Sama_3196	0.34	-0.9
3,788,146	+		Sama_3196	0.34	-0.1
3,788,146	+		Sama_3196	0.34	+0.3
3,788,146	+		Sama_3196	0.34	-1.2
3,788,146	+		Sama_3196	0.34	-0.6
3,788,146	+		Sama_3196	0.34	-0.7
3,788,146	+		Sama_3196	0.34	+0.8
3,788,146	+		Sama_3196	0.34	+0.6
3,788,146	+		Sama_3196	0.34	+1.1
3,788,146	+		Sama_3196	0.34	+0.4
3,788,147	-		Sama_3196	0.34	-0.8
3,788,147	-		Sama_3196	0.34	+0.7
3,788,147	-		Sama_3196	0.34	-0.0
3,788,147	-		Sama_3196	0.34	+1.1
3,788,147	-		Sama_3196	0.34	+1.3
3,788,147	-		Sama_3196	0.34	-0.1
3,788,147	-		Sama_3196	0.34	-0.7
3,788,147	-		Sama_3196	0.34	+0.3
3,788,147	-		Sama_3196	0.34	-1.1
3,788,147	-		Sama_3196	0.34	+3.7
3,788,147	-		Sama_3196	0.34	-0.2
3,788,147	-		Sama_3196	0.34	-0.5
3,788,147	-		Sama_3196	0.34	+0.2
3,788,147	-		Sama_3196	0.34	+1.5
3,788,147	-		Sama_3196	0.34	+0.1
3,788,147	-		Sama_3196	0.34	-0.1
3,788,147	-		Sama_3196	0.34	-0.5
3,788,147	-		Sama_3196	0.34	+0.4
3,788,147	-		Sama_3196	0.34	+1.1
3,788,162	+		Sama_3196	0.36	-0.9
3,788,163	-		Sama_3196	0.36	+0.1
3,788,163	-		Sama_3196	0.36	+0.3