Strain Fitness in Shewanella amazonensis SB2B around Sama_2941

Experiment: acetate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate
3,494,862	+				-0.9
3,494,862	+				-1.0
3,494,863	-				-0.4
3,494,947	+				+0.2
3,494,992	+				-0.0
3,494,992	+				+0.5
3,494,993	-				-1.6
3,494,993	-				-0.0
3,494,993	-				-0.8
3,494,993	-				-0.0
3,494,993	-				-0.0
3,494,993	-				-0.6
3,494,993	-				+0.3
3,494,994	+				-0.4
3,494,994	+				+1.6
3,494,994	+				-3.1
3,494,994	+				-0.5
3,494,994	+				+0.6
3,494,995	-				+1.0
3,494,995	-				-1.8
3,494,995	-				+0.3
3,494,995	-				+0.7
3,494,995	-				-0.4
3,494,995	-				+0.0
3,494,995	-				-0.4
3,494,995	-				+0.5
3,495,020	+				+0.2
3,495,020	+				-0.8
3,495,020	+				+0.0
3,495,047	-				+1.1
3,495,047	-				+1.2
3,495,082	+				-0.6
3,495,082	+				+0.3
3,495,083	-				+0.2
3,495,123	-				+0.6
3,495,133	+				+1.1
3,495,133	+				+0.6
3,495,133	+				+1.0
3,495,133	+				+1.0
3,495,134	-				+0.7
3,495,134	-				-0.7
3,495,134	-				+0.1
3,495,134	-				+0.4
3,495,134	-				-1.8
3,495,134	-				+1.0
3,495,134	-				-1.2
3,495,140	-				-0.4
3,495,140	-				-0.9
3,495,197	+				-2.4
3,495,197	+				-2.2
3,495,197	+				-0.9
3,495,197	+				-1.8
3,495,197	+				-1.5
3,495,198	-				-1.8
3,495,198	-				-2.0
3,495,198	-				-1.0
3,495,198	-				+0.8
3,495,242	+				-2.0
3,495,242	+				-0.0
3,495,444	-		Sama_2940	0.45	-1.6
3,495,484	+		Sama_2940	0.52	-1.5
3,495,526	-		Sama_2940	0.59	-1.2
3,495,599	+		Sama_2940	0.72	-0.2
3,495,599	+		Sama_2940	0.72	-1.4
3,495,599	+		Sama_2940	0.72	-3.1
3,495,599	+		Sama_2940	0.72	-0.3
3,495,599	+		Sama_2940	0.72	-0.6
3,495,599	+		Sama_2940	0.72	-0.9
3,495,599	+		Sama_2940	0.72	-1.3
3,495,599	+		Sama_2940	0.72	-0.9
3,495,599	+		Sama_2940	0.72	-1.4
3,495,599	+		Sama_2940	0.72	-1.0
3,495,599	+		Sama_2940	0.72	-0.3
3,495,599	+		Sama_2940	0.72	-2.7
3,495,599	+		Sama_2940	0.72	-0.6
3,495,599	+		Sama_2940	0.72	-2.2
3,495,600	-		Sama_2940	0.73	-1.1
3,495,600	-		Sama_2940	0.73	-1.1
3,495,600	-		Sama_2940	0.73	-0.8
3,495,600	-		Sama_2940	0.73	-2.4
3,495,600	-		Sama_2940	0.73	-1.8
3,495,602	+		Sama_2940	0.73	-1.8
3,495,602	+		Sama_2940	0.73	-1.7
3,495,602	+		Sama_2940	0.73	-1.3
3,495,602	+		Sama_2940	0.73	-0.2
3,495,603	-		Sama_2940	0.73	+0.6
3,495,603	-		Sama_2940	0.73	-2.7
3,495,638	+		Sama_2940	0.79	-2.4
3,495,638	+		Sama_2940	0.79	-2.5
3,495,638	+		Sama_2940	0.79	-1.1
3,495,638	+		Sama_2940	0.79	-1.9
3,495,639	-		Sama_2940	0.80	-2.2
3,495,639	-		Sama_2940	0.80	-1.6
3,495,644	+		Sama_2940	0.80	-1.2
3,495,644	+		Sama_2940	0.80	-1.8
3,495,644	+		Sama_2940	0.80	-1.6
3,495,644	+		Sama_2940	0.80	-1.8
3,495,645	-		Sama_2940	0.81	-2.4
3,495,757	+				-0.3
3,495,768	+				-0.0
3,495,768	+				+0.6
3,495,768	+				+0.1
3,495,769	-				+0.6
3,495,769	-				-0.6
3,495,769	-				-0.5
3,495,843	+				+1.1
3,495,843	+				+0.3
3,495,844	-				-0.2
3,495,860	-				+1.6
3,496,014	+		Sama_2941	0.12	-0.4
3,496,014	+		Sama_2941	0.12	-0.7
3,496,014	+		Sama_2941	0.12	+0.1
3,496,014	+		Sama_2941	0.12	-2.0
3,496,015	-		Sama_2941	0.12	+1.6
3,496,078	+		Sama_2941	0.16	-1.2
3,496,078	+		Sama_2941	0.16	+1.2
3,496,125	+		Sama_2941	0.19	+0.4
3,496,126	-		Sama_2941	0.19	-0.4
3,496,126	-		Sama_2941	0.19	+0.5
3,496,126	-		Sama_2941	0.19	-0.6
3,496,126	-		Sama_2941	0.19	-0.1
3,496,266	+		Sama_2941	0.29	+0.2
3,496,266	+		Sama_2941	0.29	+0.0
3,496,266	+		Sama_2941	0.29	-1.0
3,496,302	+		Sama_2941	0.31	-0.8
3,496,302	+		Sama_2941	0.31	+0.6
3,496,303	-		Sama_2941	0.31	+0.3
3,496,346	+		Sama_2941	0.34	-0.0
3,496,346	+		Sama_2941	0.34	+0.0
3,496,401	+		Sama_2941	0.38	-0.4
3,496,402	-		Sama_2941	0.38	+1.0
3,496,414	+		Sama_2941	0.39	-0.2
3,496,414	+		Sama_2941	0.39	+1.0
3,496,414	+		Sama_2941	0.39	+0.8
3,496,415	-		Sama_2941	0.39	-0.1
3,496,415	-		Sama_2941	0.39	+0.4
3,496,430	+		Sama_2941	0.40	-0.4
3,496,469	+		Sama_2941	0.43	-0.7
3,496,469	+		Sama_2941	0.43	+0.4
3,496,470	-		Sama_2941	0.43	+0.6
3,496,470	-		Sama_2941	0.43	-1.4
3,496,474	+		Sama_2941	0.43	+0.5
3,496,475	-		Sama_2941	0.43	-0.3
3,496,475	-		Sama_2941	0.43	+0.4
3,496,475	-		Sama_2941	0.43	-0.2
3,496,475	-		Sama_2941	0.43	-2.4
3,496,483	-		Sama_2941	0.44	+0.1
3,496,500	+		Sama_2941	0.45	+0.1
3,496,500	+		Sama_2941	0.45	+0.1
3,496,501	-		Sama_2941	0.45	-0.1
3,496,501	-		Sama_2941	0.45	-0.4
3,496,501	-		Sama_2941	0.45	-0.3
3,496,558	+		Sama_2941	0.49	-1.0
3,496,559	-		Sama_2941	0.49	+0.4
3,496,559	-		Sama_2941	0.49	+0.2
3,496,559	-		Sama_2941	0.49	-0.0
3,496,607	+		Sama_2941	0.52	-0.5
3,496,607	+		Sama_2941	0.52	+0.5
3,496,607	+		Sama_2941	0.52	-0.0
3,496,608	-		Sama_2941	0.52	+0.8
3,496,608	-		Sama_2941	0.52	-0.6
3,496,608	-		Sama_2941	0.52	+0.2
3,496,608	-		Sama_2941	0.52	+0.1
3,496,608	-		Sama_2941	0.52	-0.8
3,496,640	+		Sama_2941	0.54	-2.4
3,496,641	-		Sama_2941	0.54	-1.1
3,496,641	-		Sama_2941	0.54	+0.8
3,496,641	-		Sama_2941	0.54	-0.0
3,496,641	-		Sama_2941	0.54	-1.0
3,496,649	+		Sama_2941	0.55	-0.6
3,496,650	-		Sama_2941	0.55	-0.1
3,496,650	-		Sama_2941	0.55	+0.1
3,496,732	-		Sama_2941	0.61	+0.1
3,496,732	-		Sama_2941	0.61	-0.2
3,496,750	-		Sama_2941	0.62	+1.2
3,496,865	-		Sama_2941	0.70	-1.1
3,496,865	-		Sama_2941	0.70	-1.0
3,496,951	+		Sama_2941	0.76	-0.0
3,496,965	+		Sama_2941	0.77	+0.5
3,496,965	+		Sama_2941	0.77	-0.3
3,496,966	-		Sama_2941	0.77	-0.3
3,497,075	-		Sama_2941	0.84	+1.0
3,497,075	-		Sama_2941	0.84	+0.6
3,497,075	-		Sama_2941	0.84	-0.9
3,497,094	+		Sama_2941	0.85	+0.6
3,497,095	-		Sama_2941	0.85	+0.5
3,497,153	+		Sama_2941	0.89	-0.1
3,497,153	+		Sama_2941	0.89	-0.4
3,497,153	+		Sama_2941	0.89	+0.8
3,497,154	-		Sama_2941	0.89	-1.4
3,497,154	-		Sama_2941	0.89	-0.6
3,497,156	+		Sama_2941	0.90	-0.2
3,497,170	+				+0.6
3,497,226	-				+1.0
3,497,226	-				+0.7
3,497,226	-				-0.0
3,497,226	-				+0.1
3,497,298	+				-0.0
3,497,298	+				-1.7
3,497,298	+				+0.3
3,497,299	-				-1.0
3,497,299	-				-0.3
3,497,322	+				-0.1
3,497,322	+				+2.3
3,497,322	+				+0.5
3,497,322	+				+0.7
3,497,323	-				+0.1
3,497,323	-				-1.0
3,497,326	+				+1.0
3,497,366	+				+1.1
3,497,367	-				+2.4
3,497,367	-				+0.8
3,497,367	-				+0.2
3,497,400	+				+0.1
3,497,400	+				+0.1
3,497,407	-				+0.9
3,497,433	-				+0.8
3,497,445	+				+0.4
3,497,449	+				-0.2
3,497,472	-				+1.0
3,497,530	-				+0.4
3,497,530	-				-0.1
3,497,530	-				-0.6
3,497,530	-				-0.7
3,497,530	-				+1.9
3,498,115	+				+0.3
3,498,115	+				-1.0
3,498,115	+				-0.6
3,498,139	+				+0.4
3,498,165	+				+0.1
3,498,166	-				+0.1
3,498,166	-				-0.2
3,498,222	+		Sama_2943	0.17	+0.6
3,498,223	-		Sama_2943	0.17	+0.4
3,498,225	+		Sama_2943	0.18	-2.2
3,498,225	+		Sama_2943	0.18	+0.5
3,498,225	+		Sama_2943	0.18	-0.6
3,498,225	+		Sama_2943	0.18	-0.2
3,498,225	+		Sama_2943	0.18	-0.7
3,498,225	+		Sama_2943	0.18	-1.2
3,498,225	+		Sama_2943	0.18	-0.0
3,498,225	+		Sama_2943	0.18	-0.7
3,498,226	-		Sama_2943	0.18	+0.6
3,498,226	-		Sama_2943	0.18	-0.2
3,498,226	-		Sama_2943	0.18	+0.4
3,498,226	-		Sama_2943	0.18	-0.3
3,498,226	-		Sama_2943	0.18	+0.4
3,498,226	-		Sama_2943	0.18	-0.8
3,498,226	-		Sama_2943	0.18	-0.9
3,498,291	+		Sama_2943	0.45	+0.5
3,498,292	-		Sama_2943	0.46	-0.2
3,498,292	-		Sama_2943	0.46	-1.8
3,498,292	-		Sama_2943	0.46	-0.2