Strain Fitness in Shewanella amazonensis SB2B around Sama_1531

Experiment: acetate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate
1,860,572	-				+0.1
1,860,572	-				-2.1
1,860,572	-				+0.2
1,860,630	+		Sama_1530	0.11	+0.9
1,860,630	+		Sama_1530	0.11	-0.0
1,860,630	+		Sama_1530	0.11	-0.2
1,860,631	-		Sama_1530	0.11	-0.2
1,860,697	+		Sama_1530	0.17	-0.5
1,860,698	-		Sama_1530	0.17	-0.5
1,860,699	+		Sama_1530	0.17	-0.5
1,860,699	+		Sama_1530	0.17	+0.1
1,860,699	+		Sama_1530	0.17	+1.7
1,860,699	+		Sama_1530	0.17	+0.3
1,860,699	+		Sama_1530	0.17	-0.7
1,860,699	+		Sama_1530	0.17	-0.5
1,860,700	-		Sama_1530	0.18	-2.3
1,860,700	-		Sama_1530	0.18	-0.5
1,860,700	-		Sama_1530	0.18	+0.8
1,860,700	-		Sama_1530	0.18	-0.2
1,860,700	-		Sama_1530	0.18	+0.0
1,860,700	-		Sama_1530	0.18	-0.6
1,860,700	-		Sama_1530	0.18	-0.3
1,860,700	-		Sama_1530	0.18	-0.8
1,860,710	+		Sama_1530	0.19	+1.3
1,860,710	+		Sama_1530	0.19	-0.5
1,860,732	+		Sama_1530	0.21	-0.5
1,860,732	+		Sama_1530	0.21	-0.4
1,860,732	+		Sama_1530	0.21	+0.0
1,860,733	-		Sama_1530	0.21	-0.3
1,860,733	-		Sama_1530	0.21	-0.4
1,860,733	-		Sama_1530	0.21	+0.0
1,860,790	+		Sama_1530	0.27	-1.0
1,860,790	+		Sama_1530	0.27	-0.3
1,860,791	-		Sama_1530	0.27	+1.5
1,860,798	+		Sama_1530	0.27	+0.2
1,860,798	+		Sama_1530	0.27	-0.5
1,860,799	-		Sama_1530	0.27	-0.2
1,860,901	+		Sama_1530	0.38	-1.1
1,860,901	+		Sama_1530	0.38	+0.8
1,860,901	+		Sama_1530	0.38	+1.8
1,860,902	-		Sama_1530	0.38	-0.3
1,860,902	-		Sama_1530	0.38	+0.5
1,861,008	+		Sama_1530	0.48	+0.5
1,861,008	+		Sama_1530	0.48	-0.3
1,861,008	+		Sama_1530	0.48	-0.2
1,861,008	+		Sama_1530	0.48	+0.1
1,861,008	+		Sama_1530	0.48	+1.0
1,861,009	-		Sama_1530	0.48	+1.0
1,861,009	-		Sama_1530	0.48	+0.1
1,861,011	+		Sama_1530	0.49	+1.1
1,861,011	+		Sama_1530	0.49	+0.1
1,861,011	+		Sama_1530	0.49	-0.6
1,861,011	+		Sama_1530	0.49	+0.2
1,861,011	+		Sama_1530	0.49	-0.5
1,861,011	+		Sama_1530	0.49	-0.5
1,861,012	-		Sama_1530	0.49	+1.1
1,861,012	-		Sama_1530	0.49	-0.4
1,861,012	-		Sama_1530	0.49	+0.0
1,861,023	+		Sama_1530	0.50	+0.4
1,861,023	+		Sama_1530	0.50	-0.2
1,861,024	-		Sama_1530	0.50	-0.5
1,861,049	+		Sama_1530	0.52	-0.9
1,861,049	+		Sama_1530	0.52	+0.2
1,861,058	+		Sama_1530	0.53	-0.0
1,861,058	+		Sama_1530	0.53	+0.1
1,861,059	-		Sama_1530	0.53	-0.9
1,861,078	+		Sama_1530	0.55	+0.3
1,861,078	+		Sama_1530	0.55	+0.6
1,861,089	+		Sama_1530	0.56	+0.6
1,861,102	+		Sama_1530	0.58	-0.6
1,861,102	+		Sama_1530	0.58	+0.9
1,861,102	+		Sama_1530	0.58	-1.7
1,861,103	-		Sama_1530	0.58	-1.5
1,861,103	-		Sama_1530	0.58	-0.1
1,861,104	+		Sama_1530	0.58	-0.8
1,861,104	+		Sama_1530	0.58	-0.5
1,861,104	+		Sama_1530	0.58	+0.5
1,861,104	+		Sama_1530	0.58	-1.3
1,861,104	+		Sama_1530	0.58	-1.6
1,861,104	+		Sama_1530	0.58	+0.3
1,861,104	+		Sama_1530	0.58	-0.8
1,861,104	+		Sama_1530	0.58	-0.7
1,861,105	-		Sama_1530	0.58	+2.1
1,861,105	-		Sama_1530	0.58	-0.5
1,861,105	-		Sama_1530	0.58	-0.1
1,861,105	-		Sama_1530	0.58	-0.2
1,861,105	-		Sama_1530	0.58	+2.8
1,861,231	+		Sama_1530	0.71	+0.7
1,861,231	+		Sama_1530	0.71	-0.0
1,861,231	+		Sama_1530	0.71	-0.3
1,861,231	+		Sama_1530	0.71	+1.0
1,861,232	-		Sama_1530	0.71	+0.2
1,861,232	-		Sama_1530	0.71	-0.1
1,861,232	-		Sama_1530	0.71	-1.3
1,861,232	-		Sama_1530	0.71	+0.4
1,861,232	-		Sama_1530	0.71	-0.0
1,861,232	-		Sama_1530	0.71	-1.5
1,861,232	-		Sama_1530	0.71	-0.8
1,861,234	+		Sama_1530	0.71	-0.6
1,861,234	+		Sama_1530	0.71	+0.7
1,861,234	+		Sama_1530	0.71	-0.1
1,861,234	+		Sama_1530	0.71	+0.5
1,861,241	+		Sama_1530	0.72	+0.6
1,861,241	+		Sama_1530	0.72	+0.6
1,861,241	+		Sama_1530	0.72	+1.5
1,861,241	+		Sama_1530	0.72	-0.8
1,861,242	-		Sama_1530	0.72	+0.1
1,861,489	+				+1.8
1,861,490	-				+0.5
1,861,526	-				+0.1
1,861,531	+				+0.5
1,861,532	-				+0.2
1,861,532	-				-0.5
1,861,532	-				+0.1
1,861,532	-				+1.2
1,861,542	+				-0.2
1,861,545	+				-0.2
1,861,546	-				-1.7
1,861,546	-				+0.8
1,861,551	+				-2.2
1,861,552	-				-0.2
1,861,552	-				-0.2
1,861,554	+				-1.2
1,861,638	-				+0.4
1,861,638	-				+0.7
1,861,746	+		Sama_1531	0.19	+1.1
1,861,767	+		Sama_1531	0.22	-0.0
1,861,768	-		Sama_1531	0.22	+1.7
1,861,778	+		Sama_1531	0.23	+0.0
1,861,821	+		Sama_1531	0.27	-0.7
1,861,821	+		Sama_1531	0.27	-0.1
1,861,823	+		Sama_1531	0.28	-0.0
1,861,823	+		Sama_1531	0.28	-0.5
1,861,823	+		Sama_1531	0.28	+1.2
1,861,823	+		Sama_1531	0.28	+0.5
1,861,824	-		Sama_1531	0.28	-0.6
1,861,824	-		Sama_1531	0.28	-0.0
1,862,005	+		Sama_1531	0.48	+1.1
1,862,005	+		Sama_1531	0.48	-1.1
1,862,006	-		Sama_1531	0.48	-0.3
1,862,006	-		Sama_1531	0.48	+0.5
1,862,006	-		Sama_1531	0.48	+1.9
1,862,047	-		Sama_1531	0.52	+0.5
1,862,076	+		Sama_1531	0.55	+0.3
1,862,078	+		Sama_1531	0.56	-0.9
1,862,079	-		Sama_1531	0.56	-2.5
1,862,079	-		Sama_1531	0.56	+0.6
1,862,079	-		Sama_1531	0.56	-1.8
1,862,088	+		Sama_1531	0.57	-2.2
1,862,088	+		Sama_1531	0.57	-0.1
1,862,153	+		Sama_1531	0.64	+0.3
1,862,154	-		Sama_1531	0.64	-2.1
1,862,154	-		Sama_1531	0.64	-0.0
1,862,175	+		Sama_1531	0.66	+2.3
1,862,175	+		Sama_1531	0.66	-0.2
1,862,201	-		Sama_1531	0.69	+0.0
1,862,201	-		Sama_1531	0.69	+0.4
1,862,213	+		Sama_1531	0.70	+0.0
1,862,213	+		Sama_1531	0.70	+0.5
1,862,213	+		Sama_1531	0.70	+0.3
1,862,235	+		Sama_1531	0.73	-0.8
1,862,245	-		Sama_1531	0.74	-0.4
1,862,341	+		Sama_1531	0.84	-0.3
1,862,341	+		Sama_1531	0.84	+1.5
1,862,341	+		Sama_1531	0.84	-0.8
1,862,341	+		Sama_1531	0.84	-1.0
1,862,342	-		Sama_1531	0.84	-0.3
1,862,342	-		Sama_1531	0.84	-0.3
1,862,342	-		Sama_1531	0.84	+0.6
1,862,342	-		Sama_1531	0.84	+0.4
1,862,342	-		Sama_1531	0.84	-1.1
1,862,347	-		Sama_1531	0.85	-1.0
1,862,382	+		Sama_1531	0.89	-0.2
1,862,382	+		Sama_1531	0.89	+0.2
1,862,383	-		Sama_1531	0.89	-0.3
1,862,397	+				+0.3
1,862,397	+				+1.1
1,862,398	-				-0.3
1,862,398	-				+0.0
1,862,398	-				+0.8
1,862,461	+				+1.8
1,862,462	-				+1.0
1,862,462	-				-0.1
1,862,462	-				+0.7
1,862,475	+				-1.4
1,862,476	-				+0.5
1,862,501	-				+0.9
1,862,501	-				-1.8
1,862,501	-				-0.1
1,862,531	+				-0.7
1,862,531	+				-1.1
1,862,551	+				-0.2
1,862,552	-				-0.2
1,862,569	+				+0.7
1,862,651	+				-0.9
1,862,653	+				-0.5
1,862,655	+				-0.7
1,862,655	+				+0.2
1,862,655	+				-0.3
1,862,656	-				-0.3
1,862,662	+				-0.9
1,862,663	-				-0.5
1,862,663	-				+0.3
1,862,668	-				+0.5
1,862,671	-				-0.4
1,862,674	+				-2.8
1,862,705	+				-0.5
1,862,717	+				+0.0
1,862,717	+				+0.8
1,862,718	-				-2.5
1,862,784	+				+1.3
1,862,861	-		Sama_1532	0.17	+0.0
1,862,905	+		Sama_1532	0.21	+0.4
1,862,905	+		Sama_1532	0.21	-1.5
1,862,905	+		Sama_1532	0.21	-0.3
1,862,905	+		Sama_1532	0.21	-0.1
1,862,905	+		Sama_1532	0.21	-0.8
1,862,906	-		Sama_1532	0.21	-0.3
1,862,906	-		Sama_1532	0.21	-0.5
1,862,906	-		Sama_1532	0.21	-0.5
1,862,978	-		Sama_1532	0.28	+1.5
1,863,002	+		Sama_1532	0.30	+0.4
1,863,068	+		Sama_1532	0.36	-0.1
1,863,068	+		Sama_1532	0.36	-1.2
1,863,074	+		Sama_1532	0.37	-1.5
1,863,074	+		Sama_1532	0.37	+0.1
1,863,075	-		Sama_1532	0.37	-0.2
1,863,075	-		Sama_1532	0.37	+0.3
1,863,075	-		Sama_1532	0.37	-0.5
1,863,180	-		Sama_1532	0.47	+1.0
1,863,200	+		Sama_1532	0.49	-0.2
1,863,200	+		Sama_1532	0.49	-0.0
1,863,200	+		Sama_1532	0.49	-1.1
1,863,200	+		Sama_1532	0.49	+1.2
1,863,201	-		Sama_1532	0.49	+0.0
1,863,201	-		Sama_1532	0.49	-0.8
1,863,201	-		Sama_1532	0.49	-1.1
1,863,201	-		Sama_1532	0.49	+1.8
1,863,201	-		Sama_1532	0.49	+0.2
1,863,238	+		Sama_1532	0.53	-0.5
1,863,238	+		Sama_1532	0.53	+0.4
1,863,238	+		Sama_1532	0.53	-0.6
1,863,238	+		Sama_1532	0.53	+0.5
1,863,242	-		Sama_1532	0.53	+0.1
1,863,247	+		Sama_1532	0.54	-1.3
1,863,247	+		Sama_1532	0.54	-0.1
1,863,247	+		Sama_1532	0.54	-0.1
1,863,247	+		Sama_1532	0.54	-0.4
1,863,248	-		Sama_1532	0.54	-0.5
1,863,248	-		Sama_1532	0.54	+1.5
1,863,248	-		Sama_1532	0.54	-0.2
1,863,248	-		Sama_1532	0.54	-0.5
1,863,248	-		Sama_1532	0.54	+0.5
1,863,386	+		Sama_1532	0.67	-0.5
1,863,387	-		Sama_1532	0.67	+1.2
1,863,389	-		Sama_1532	0.67	-0.9
1,863,402	+		Sama_1532	0.68	+0.5
1,863,402	+		Sama_1532	0.68	+2.2
1,863,414	+		Sama_1532	0.70	-0.3
1,863,415	-		Sama_1532	0.70	-1.6