Strain Fitness in Shewanella loihica PV-4 around Shew_3790

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,508,775	-				-0.7
4,508,846	-		Shew_3789	0.15	-0.1
4,508,846	-		Shew_3789	0.15	+0.1
4,508,940	+		Shew_3789	0.25	+0.2
4,508,945	+		Shew_3789	0.26	-1.7
4,508,963	+		Shew_3789	0.27	-0.8
4,509,029	+		Shew_3789	0.34	-0.2
4,509,048	-		Shew_3789	0.36	-0.3
4,509,105	-		Shew_3789	0.42	+0.2
4,509,143	+		Shew_3789	0.46	+0.1
4,509,244	+		Shew_3789	0.57	-0.4
4,509,382	-		Shew_3789	0.71	+0.1
4,509,538	+		Shew_3789	0.87	-0.8
4,509,595	+				-0.6
4,509,745	+				+0.2
4,509,747	-				+0.6
4,509,818	+		Shew_3790	0.16	-0.5
4,509,836	+		Shew_3790	0.18	-0.0
4,510,103	-		Shew_3790	0.47	-0.2
4,510,225	-		Shew_3790	0.61	-0.2
4,510,298	+		Shew_3790	0.69	-0.6
4,510,369	+		Shew_3790	0.77	-0.3
4,510,396	-		Shew_3790	0.80	+0.1
4,510,813	-				+0.6
4,511,000	+		Shew_3791	0.29	-0.1
4,511,056	-		Shew_3791	0.38	+0.1
4,511,079	-		Shew_3791	0.41	-0.1
4,511,135	-		Shew_3791	0.50	-0.5
4,511,170	+		Shew_3791	0.55	+0.7
4,511,178	-		Shew_3791	0.56	-0.6
4,511,183	+		Shew_3791	0.57	+0.5
4,511,366	+		Shew_3791	0.85	-0.2
4,511,374	-		Shew_3791	0.86	+0.1
4,511,374	-		Shew_3791	0.86	+0.6
4,511,374	-		Shew_3791	0.86	-0.3
4,511,507	+				-0.2
4,511,507	+				-0.1