Strain Fitness in Shewanella loihica PV-4 around Shew_3412

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,062,104	-		Shew_3410	0.87	+1.7
4,062,290	+				+1.7
4,062,344	-	zntR	Shew_3411	0.11	-0.6
4,062,370	-	zntR	Shew_3411	0.16	+0.2
4,062,499	-	zntR	Shew_3411	0.43	-1.1
4,062,509	-	zntR	Shew_3411	0.45	+0.0
4,062,596	-	zntR	Shew_3411	0.64	-0.4
4,062,655	-	zntR	Shew_3411	0.76	-0.2
4,062,655	-	zntR	Shew_3411	0.76	-0.5
4,062,655	-	zntR	Shew_3411	0.76	+0.3
4,062,832	+				+0.4
4,063,347	+	purH	Shew_3412	0.18	-1.2
4,063,558	+	purH	Shew_3412	0.31	-0.0
4,063,558	+	purH	Shew_3412	0.31	-2.4
4,063,842	-	purH	Shew_3412	0.49	-0.8
4,063,842	-	purH	Shew_3412	0.49	-1.2
4,063,936	+	purH	Shew_3412	0.55	-2.3
4,064,011	-	purH	Shew_3412	0.59	+1.0
4,064,163	+	purH	Shew_3412	0.69	-1.8
4,064,325	+	purH	Shew_3412	0.79	-1.8
4,064,432	-	purH	Shew_3412	0.86	-0.2
4,064,873	-		Shew_3413	0.13	-0.2
4,064,883	-		Shew_3413	0.13	-0.5
4,065,023	-		Shew_3413	0.24	-0.3