Strain Fitness in Shewanella loihica PV-4 around Shew_2668
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,155,535 | + | +2.1 | |||
3,155,651 | - | +1.1 | |||
3,155,660 | + | +1.6 | |||
3,155,660 | + | +1.3 | |||
3,155,784 | - | +2.2 | |||
3,156,029 | - | +2.7 | |||
3,156,089 | - | +1.6 | |||
3,156,089 | - | +1.3 | |||
3,156,355 | - | Shew_2668 | 0.13 | +1.8 | |
3,156,384 | - | Shew_2668 | 0.15 | +1.6 | |
3,156,575 | + | Shew_2668 | 0.26 | +1.7 | |
3,156,575 | + | Shew_2668 | 0.26 | +2.2 | |
3,156,673 | + | Shew_2668 | 0.32 | +1.0 | |
3,157,354 | + | Shew_2668 | 0.74 | +1.9 | |
3,157,844 | - | +0.8 | |||
3,158,462 | - | Shew_2669 | 0.24 | +0.2 |
Or see this region's nucleotide sequence