Strain Fitness in Shewanella loihica PV-4 around Shew_2194
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,552,777 | + | +0.3 | |||
2,553,567 | - | Shew_2194 | 0.69 | -0.6 | |
2,554,361 | - | Shew_2195 | 0.38 | +0.2 | |
2,554,407 | + | Shew_2195 | 0.42 | -0.6 | |
2,554,407 | + | Shew_2195 | 0.42 | -0.6 | |
2,554,415 | - | Shew_2195 | 0.42 | +0.4 | |
2,554,455 | + | Shew_2195 | 0.45 | +0.7 | |
2,554,491 | + | Shew_2195 | 0.48 | -0.0 | |
2,554,499 | - | Shew_2195 | 0.49 | -0.2 | |
2,554,620 | + | Shew_2195 | 0.58 | -0.8 | |
2,554,758 | + | Shew_2195 | 0.69 | +0.2 |
Or see this region's nucleotide sequence