Strain Fitness in Shewanella loihica PV-4 around Shew_1319

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,531,058	-				-1.0
1,531,098	-				-1.0
1,531,123	+				-0.9
1,531,139	+				-0.0
1,531,139	+				-0.4
1,531,139	+				-0.4
1,531,139	+				-0.4
1,531,147	-				+0.1
1,531,147	-				-0.5
1,531,147	-				-0.5
1,531,147	-				-0.2
1,531,324	+		Shew_1318	0.27	-0.4
1,531,633	-		Shew_1318	0.58	-0.2
1,531,661	+		Shew_1318	0.61	-1.1
1,531,669	-		Shew_1318	0.62	+0.2
1,531,775	+		Shew_1318	0.72	-0.4
1,531,775	+		Shew_1318	0.72	+0.9
1,531,780	+		Shew_1318	0.73	-0.5
1,531,780	+		Shew_1318	0.73	+0.6
1,531,783	-		Shew_1318	0.73	-2.1
1,531,783	-		Shew_1318	0.73	-1.8
1,531,788	-		Shew_1318	0.73	-0.9
1,531,788	-		Shew_1318	0.73	-0.3
1,531,870	-		Shew_1318	0.82	-0.6
1,531,946	-		Shew_1318	0.89	-0.6
1,532,109	+				-0.3
1,532,223	-		Shew_1319	0.15	-1.1
1,532,489	+		Shew_1319	0.37	+0.1
1,532,520	+		Shew_1319	0.40	-0.2
1,532,535	+		Shew_1319	0.41	-0.2
1,532,623	+		Shew_1319	0.49	-0.5
1,532,736	-		Shew_1319	0.59	-1.4
1,532,736	-		Shew_1319	0.59	+0.9
1,532,736	-		Shew_1319	0.59	-0.9
1,532,736	-		Shew_1319	0.59	-0.7
1,532,752	-		Shew_1319	0.60	-1.8
1,532,762	-		Shew_1319	0.61	+1.1
1,532,802	+		Shew_1319	0.64	-1.4
1,532,810	-		Shew_1319	0.65	-1.4
1,532,810	-		Shew_1319	0.65	-0.1
1,532,924	+		Shew_1319	0.75	+0.3
1,532,924	+		Shew_1319	0.75	-0.8
1,532,924	+		Shew_1319	0.75	-0.1
1,532,932	-		Shew_1319	0.75	-0.8
1,532,932	-		Shew_1319	0.75	-0.4
1,533,159	-				-0.4
1,533,164	-				-0.3
1,533,200	+				+0.6
1,533,200	+				-0.0
1,533,208	-				+1.6
1,533,208	-				+0.7
1,533,350	+		Shew_1320	0.12	-0.0
1,533,360	+		Shew_1320	0.13	-3.5
1,533,416	-		Shew_1320	0.18	+0.2
1,533,416	-		Shew_1320	0.18	-0.7
1,533,426	-		Shew_1320	0.19	+0.1
1,533,469	-		Shew_1320	0.22	-0.2
1,533,573	+		Shew_1320	0.31	-0.0
1,533,605	+		Shew_1320	0.33	-1.2
1,533,774	+		Shew_1320	0.47	-0.2
1,533,838	-		Shew_1320	0.53	-1.4
1,533,838	-		Shew_1320	0.53	-0.5
1,533,838	-		Shew_1320	0.53	-1.7
1,533,996	+		Shew_1320	0.66	+1.1
1,534,055	-		Shew_1320	0.71	-0.1
1,534,096	+		Shew_1320	0.74	-0.2