Experiment: copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO3949 and SO3950 are separated by 16 nucleotides SO3950 and SO3951 are separated by 5 nucleotides SO3951 and SO3952 are separated by 11 nucleotides SO3952 and SO3953 are separated by 56 nucleotides SO3953 and SO3954 overlap by 4 nucleotides
SO3949: SO3949 - BolA/YrbA family protein (NCBI ptt file), at 4,094,712 to 4,094,963
SO3949
SO3950: SO3950 - SpoIIAA family protein (NCBI ptt file), at 4,094,980 to 4,095,264
SO3950
SO3951: SO3951 - conserved hypothetical protein (NCBI ptt file), at 4,095,270 to 4,095,923
SO3951
SO3952: SO3952 - mce-related protein (NCBI ptt file), at 4,095,935 to 4,096,408
SO3952
SO3953: SO3953 - conserved hypothetical protein TIGR00056 (NCBI ptt file), at 4,096,465 to 4,097,250
SO3953
SO3954: SO3954 - ABC transporter, ATP-binding protein, putative (NCBI ptt file), at 4,097,247 to 4,098,065
SO3954
Position (kb)
4095
4096
4097 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4095.244 kb on - strand at 4095.244 kb on - strand at 4095.274 kb on - strand at 4095.388 kb on - strand, within SO3951 at 4095.664 kb on - strand, within SO3951 at 4095.677 kb on - strand, within SO3951 at 4095.965 kb on - strand at 4095.997 kb on - strand, within SO3952 at 4095.997 kb on - strand, within SO3952 at 4095.997 kb on - strand, within SO3952 at 4096.071 kb on - strand, within SO3952 at 4096.195 kb on - strand, within SO3952 at 4096.232 kb on - strand, within SO3952 at 4096.293 kb on - strand, within SO3952 at 4096.293 kb on - strand, within SO3952 at 4096.293 kb on - strand, within SO3952 at 4096.293 kb on - strand, within SO3952 at 4096.293 kb on - strand, within SO3952 at 4096.431 kb on - strand at 4096.673 kb on - strand, within SO3953 at 4096.864 kb on - strand, within SO3953 at 4096.864 kb on - strand, within SO3953 at 4096.930 kb on - strand, within SO3953 at 4096.942 kb on - strand, within SO3953 at 4097.043 kb on - strand, within SO3953 at 4097.043 kb on - strand, within SO3953 at 4097.043 kb on - strand, within SO3953 at 4097.043 kb on - strand, within SO3953 at 4097.136 kb on - strand, within SO3953 at 4097.282 kb on + strand at 4097.317 kb on - strand at 4097.319 kb on + strand at 4097.342 kb on + strand, within SO3954 at 4097.349 kb on - strand, within SO3954 at 4097.367 kb on + strand, within SO3954 at 4097.373 kb on - strand, within SO3954
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 0.64 mM remove 4,095,244 - -0.5 4,095,244 - +1.2 4,095,274 - -0.3 4,095,388 - SO3951 0.18 -1.8 4,095,664 - SO3951 0.60 -0.9 4,095,677 - SO3951 0.62 -1.2 4,095,965 - -1.1 4,095,997 - SO3952 0.13 -1.7 4,095,997 - SO3952 0.13 -0.8 4,095,997 - SO3952 0.13 -0.9 4,096,071 - SO3952 0.29 -1.5 4,096,195 - SO3952 0.55 -0.8 4,096,232 - SO3952 0.63 -1.4 4,096,293 - SO3952 0.76 -1.3 4,096,293 - SO3952 0.76 -0.5 4,096,293 - SO3952 0.76 -0.7 4,096,293 - SO3952 0.76 -0.6 4,096,293 - SO3952 0.76 -0.6 4,096,431 - -0.2 4,096,673 - SO3953 0.26 -1.2 4,096,864 - SO3953 0.51 -1.6 4,096,864 - SO3953 0.51 -3.3 4,096,930 - SO3953 0.59 -1.0 4,096,942 - SO3953 0.61 -1.4 4,097,043 - SO3953 0.74 -3.0 4,097,043 - SO3953 0.74 -0.3 4,097,043 - SO3953 0.74 -1.0 4,097,043 - SO3953 0.74 -1.0 4,097,136 - SO3953 0.85 -0.4 4,097,282 + -1.6 4,097,317 - -0.6 4,097,319 + -2.8 4,097,342 + SO3954 0.12 -2.0 4,097,349 - SO3954 0.12 -1.6 4,097,367 + SO3954 0.15 -1.3 4,097,373 - SO3954 0.15 -1.4
Or see this region's nucleotide sequence