Strain Fitness in Marinobacter adhaerens HP15 around HP15_2472

Experiment: Fumarate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2471 and HP15_2472 are separated by 13 nucleotidesHP15_2472 and HP15_2473 are separated by 845 nucleotides HP15_2471: HP15_2471 - apolipoprotein N-acyltransferase, at 2,610,002 to 2,611,564 _2471 HP15_2472: HP15_2472 - hypothetical protein, at 2,611,578 to 2,611,685 _2472 HP15_2473: HP15_2473 - leucyl-tRNA synthetase, at 2,612,531 to 2,615,116 _2473 Position (kb) 2611 2612Strain fitness (log2 ratio) -2 -1 0 1at 2611.609 kb on - strand, within HP15_2472at 2611.619 kb on + strand, within HP15_2472at 2611.692 kb on - strandat 2611.697 kb on - strandat 2612.060 kb on + strandat 2612.147 kb on + strandat 2612.194 kb on - strandat 2612.280 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fumarate
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2,611,609 - HP15_2472 0.29 +1.4
2,611,619 + HP15_2472 0.38 +1.6
2,611,692 - -0.0
2,611,697 - +1.5
2,612,060 + -0.3
2,612,147 + -1.8
2,612,194 - -0.7
2,612,280 - -0.3

Or see this region's nucleotide sequence