Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3943 and Shewana3_3944 are separated by 16 nucleotides Shewana3_3944 and Shewana3_3945 are separated by 58 nucleotides Shewana3_3945 and Shewana3_3946 are separated by 293 nucleotides
Shewana3_3943: Shewana3_3943 - cell division protein FtsZ (RefSeq), at 4,740,699 to 4,741,901
_3943
Shewana3_3944: Shewana3_3944 - methyltransferase type 11 (RefSeq), at 4,741,918 to 4,742,556
_3944
Shewana3_3945: Shewana3_3945 - hypothetical protein (RefSeq), at 4,742,615 to 4,742,968
_3945
Shewana3_3946: Shewana3_3946 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq), at 4,743,262 to 4,745,382
_3946
Position (kb)
4741
4742
4743 Strain fitness (log2 ratio)
-1
0
1 at 4741.063 kb on + strand, within Shewana3_3943 at 4741.590 kb on - strand, within Shewana3_3943 at 4741.674 kb on - strand, within Shewana3_3943 at 4741.716 kb on - strand, within Shewana3_3943 at 4741.774 kb on + strand, within Shewana3_3943 at 4741.780 kb on - strand, within Shewana3_3943 at 4742.051 kb on + strand, within Shewana3_3944 at 4742.051 kb on + strand, within Shewana3_3944 at 4742.059 kb on - strand, within Shewana3_3944 at 4742.076 kb on - strand, within Shewana3_3944 at 4742.078 kb on + strand, within Shewana3_3944 at 4742.109 kb on - strand, within Shewana3_3944 at 4742.282 kb on + strand, within Shewana3_3944 at 4742.461 kb on + strand, within Shewana3_3944 at 4742.469 kb on - strand, within Shewana3_3944 at 4742.541 kb on + strand at 4742.786 kb on + strand, within Shewana3_3945 at 4742.791 kb on - strand, within Shewana3_3945 at 4742.794 kb on - strand, within Shewana3_3945 at 4742.866 kb on + strand, within Shewana3_3945 at 4742.874 kb on - strand, within Shewana3_3945 at 4742.912 kb on + strand, within Shewana3_3945 at 4742.925 kb on - strand, within Shewana3_3945 at 4742.943 kb on - strand at 4742.982 kb on - strand at 4743.296 kb on + strand at 4743.341 kb on - strand at 4743.369 kb on + strand at 4743.444 kb on - strand at 4743.454 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 4,741,063 + Shewana3_3943 0.30 -0.4 4,741,590 - Shewana3_3943 0.74 +0.1 4,741,674 - Shewana3_3943 0.81 -0.8 4,741,716 - Shewana3_3943 0.85 +0.6 4,741,774 + Shewana3_3943 0.89 +0.6 4,741,780 - Shewana3_3943 0.90 +0.2 4,742,051 + Shewana3_3944 0.21 +0.6 4,742,051 + Shewana3_3944 0.21 -1.0 4,742,059 - Shewana3_3944 0.22 -1.5 4,742,076 - Shewana3_3944 0.25 +0.2 4,742,078 + Shewana3_3944 0.25 -1.2 4,742,109 - Shewana3_3944 0.30 -1.0 4,742,282 + Shewana3_3944 0.57 +0.2 4,742,461 + Shewana3_3944 0.85 +0.2 4,742,469 - Shewana3_3944 0.86 -1.0 4,742,541 + +0.5 4,742,786 + Shewana3_3945 0.48 +0.2 4,742,791 - Shewana3_3945 0.50 -0.0 4,742,794 - Shewana3_3945 0.51 +0.6 4,742,866 + Shewana3_3945 0.71 +0.2 4,742,874 - Shewana3_3945 0.73 +1.1 4,742,912 + Shewana3_3945 0.84 +0.6 4,742,925 - Shewana3_3945 0.88 +0.5 4,742,943 - -0.5 4,742,982 - +0.4 4,743,296 + +0.4 4,743,341 - -0.5 4,743,369 + -0.7 4,743,444 - +0.3 4,743,454 + -0.3
Or see this region's nucleotide sequence