Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3871

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
4,646,010	+		Shewana3_3869	0.86	-0.2
4,646,010	+		Shewana3_3869	0.86	-0.9
4,646,011	+		Shewana3_3869	0.87	+0.4
4,646,011	+		Shewana3_3869	0.87	+0.4
4,646,011	+		Shewana3_3869	0.87	+0.4
4,646,011	+		Shewana3_3869	0.87	+0.3
4,646,011	+		Shewana3_3869	0.87	+1.2
4,646,016	+		Shewana3_3869	0.87	+0.7
4,646,019	-		Shewana3_3869	0.88	+0.1
4,646,019	-		Shewana3_3869	0.88	+0.1
4,646,019	-		Shewana3_3869	0.88	-0.9
4,646,019	-		Shewana3_3869	0.88	+0.4
4,646,021	+		Shewana3_3869	0.88	+0.5
4,646,024	-		Shewana3_3869	0.89	+0.2
4,646,029	-		Shewana3_3869	0.90	+0.4
4,646,041	-				+0.2
4,646,051	-				-3.4
4,646,122	+				-1.0
4,646,129	+				+0.5
4,646,129	-				-1.7
4,646,129	-				+0.1
4,646,333	+				+0.1
4,646,397	+				+0.4
4,646,397	+				+0.8
4,646,405	-				+0.8
4,646,424	-				+0.8
4,646,484	-				-2.5
4,646,484	-				+0.1
4,646,502	+				+0.3
4,646,508	-				-1.0
4,646,515	-				+0.3
4,646,515	-				-0.2
4,646,515	-				+0.1
4,646,516	-				-0.1
4,646,547	+				+0.3
4,646,548	-				-0.6
4,646,590	+		Shewana3_3870	0.23	-0.2
4,646,606	+		Shewana3_3870	0.38	+0.8
4,646,611	-		Shewana3_3870	0.43	-1.4
4,646,621	+		Shewana3_3870	0.52	+0.4
4,646,621	+		Shewana3_3870	0.52	-1.1
4,646,621	+		Shewana3_3870	0.52	+0.2
4,646,621	+		Shewana3_3870	0.52	-1.3
4,646,621	+		Shewana3_3870	0.52	-0.8
4,646,621	+		Shewana3_3870	0.52	-0.0
4,646,621	+		Shewana3_3870	0.52	+0.0
4,646,621	+		Shewana3_3870	0.52	-1.0
4,646,621	+		Shewana3_3870	0.52	-2.0
4,646,621	+		Shewana3_3870	0.52	+0.2
4,646,621	+		Shewana3_3870	0.52	-0.8
4,646,621	+		Shewana3_3870	0.52	-0.5
4,646,621	+		Shewana3_3870	0.52	+0.4
4,646,621	+		Shewana3_3870	0.52	-1.5
4,646,629	-		Shewana3_3870	0.60	-0.0
4,646,629	-		Shewana3_3870	0.60	-1.2
4,646,629	-		Shewana3_3870	0.60	-1.3
4,646,629	-		Shewana3_3870	0.60	-3.8
4,646,629	-		Shewana3_3870	0.60	-0.2
4,646,629	-		Shewana3_3870	0.60	+0.8
4,646,629	-		Shewana3_3870	0.60	-0.6
4,646,629	-		Shewana3_3870	0.60	-0.0
4,646,629	-		Shewana3_3870	0.60	-0.2
4,646,664	+				-1.0
4,646,672	-				+0.2
4,646,682	-				-1.1
4,646,683	-				-1.1
4,646,689	-				+0.2
4,646,700	+				-1.1
4,646,700	+				+0.5
4,646,700	+				+0.0
4,646,700	+				-0.6
4,646,700	+				-0.0
4,646,700	+				-1.1
4,646,700	+				+0.2
4,646,700	+				+0.4
4,646,700	+				+0.3
4,646,700	+				+0.2
4,646,700	+				+0.0
4,646,701	+				+0.6
4,646,708	-				+0.6
4,646,708	-				-0.1
4,646,708	-				-1.8
4,646,708	-				-1.3
4,646,708	-				-0.5
4,646,708	-				+0.6
4,646,708	-				-0.7
4,646,708	-				+0.2
4,646,708	-				-0.0
4,646,708	-				-0.6
4,646,708	-				-0.1
4,646,708	-				-0.2
4,646,711	+				+0.8
4,646,711	+				+0.2
4,646,718	-				-1.2
4,646,718	-				+0.2
4,646,719	-				-1.1
4,646,719	-				+0.2
4,646,719	-				-1.3
4,646,727	+				-2.9
4,646,735	-				-0.4
4,646,737	-				+0.0
4,646,791	+				-0.9
4,646,791	+				-1.5
4,646,796	+				+0.3
4,646,801	+				+0.3
4,646,801	+				+0.2
4,646,804	-				-0.5
4,646,804	-				-1.2
4,646,807	-				+0.2
4,646,809	-				+0.1
4,646,809	-				-0.5
4,646,809	-				+0.0
4,646,809	-				-2.3
4,646,848	+				+0.0
4,646,859	+				-6.7
4,646,859	+				-1.0
4,646,859	+				+0.4
4,646,859	+				-1.3
4,646,859	+				-0.3
4,646,859	+				-1.3
4,646,859	+				+0.8
4,646,859	+				-1.1
4,646,859	+				-0.6
4,646,859	+				-0.1
4,646,859	+				+0.4
4,646,859	+				-0.5
4,646,859	+				-0.5
4,646,859	+				-0.1
4,646,859	+				-1.0
4,646,859	+				+0.2
4,646,859	+				-0.2
4,646,859	+				+0.1
4,646,859	+				-0.8
4,646,859	+				-1.3
4,646,859	+				+0.2
4,646,859	+				-0.7
4,646,859	+				+0.7
4,646,859	+				+0.2
4,646,859	+				-0.2
4,646,859	+				-1.0
4,646,859	+				-0.7
4,646,859	+				+0.4
4,646,859	+				+0.4
4,646,859	+				-0.7
4,646,859	+				+0.5
4,646,859	+				+0.3
4,646,859	+				-0.2
4,646,859	+				+0.3
4,646,859	+				+0.2
4,646,859	+				-1.1
4,646,860	+				+0.1
4,646,860	+				+0.2
4,646,860	+				+0.3
4,646,860	+				-1.2
4,646,860	+				+0.3
4,646,860	+				+0.1
4,646,860	+				+0.5
4,646,860	+				+0.2
4,646,860	+				-0.7
4,646,860	+				-1.0
4,646,860	+				-1.2
4,646,860	+				+0.3
4,646,860	+				-0.5
4,646,867	-				+0.1
4,646,867	-				-0.9
4,646,867	-				+0.1
4,646,867	-				+0.2
4,646,867	-				+0.0
4,646,867	-				-0.1
4,646,867	-				-0.8
4,646,867	-				+0.4
4,646,867	-				+0.1
4,646,867	-				-1.1
4,646,867	-				-1.0
4,646,867	-				-0.9
4,646,867	-				+0.1
4,646,867	-				-0.3
4,646,867	-				-0.1
4,646,867	-				+0.2
4,646,867	-				+0.0
4,646,867	-				+0.1
4,646,867	-				+0.1
4,646,867	-				-0.3
4,646,867	-				+0.1
4,646,867	-				-0.6
4,646,867	-				-1.2
4,646,867	-				+0.2
4,646,867	-				-1.0
4,646,867	-				-0.7
4,646,867	-				-0.1
4,646,867	-				-2.0
4,646,867	-				+0.6
4,646,867	-				-1.3
4,646,867	-				+0.4
4,646,867	-				-1.4
4,646,868	-				+0.0
4,646,868	-				-1.1
4,646,868	-				-0.9
4,646,868	-				-0.1
4,646,868	-				-1.3
4,646,868	-				+0.1
4,646,868	-				-0.2
4,646,868	-				-1.0
4,646,868	-				+0.4
4,646,868	-				-0.0
4,646,868	-				+0.4
4,646,868	-				+0.2
4,646,868	-				+0.4
4,646,870	+				+0.3
4,646,870	+				+0.2
4,646,870	+				-4.2
4,646,870	+				+0.2
4,646,870	+				+0.1
4,646,870	+				+0.5
4,646,870	+				-0.1
4,646,870	+				+0.4
4,646,870	+				+0.3
4,646,870	+				+0.1
4,646,870	+				-0.7
4,646,870	+				-1.5
4,646,870	+				-0.2
4,646,870	+				+0.5
4,646,870	+				-0.1
4,646,870	+				-1.1
4,646,878	-				+0.3
4,646,878	-				-1.2
4,646,878	-				+0.5
4,646,878	-				-1.3
4,646,878	-				+0.3
4,646,878	-				+0.6
4,646,878	-				+0.3
4,646,878	-				-0.5
4,646,882	+				+0.2
4,646,882	+				-0.2
4,646,885	+				-1.6
4,646,926	+				-0.8
4,646,930	+				+0.1
4,646,930	+				+0.5
4,646,930	+				-0.7
4,646,937	+				-1.4
4,646,938	-				-0.0
4,646,938	-				-1.8
4,646,938	-				+0.3
4,646,938	-				+0.1
4,646,944	-				+0.2
4,646,945	-				+0.1
4,646,955	-				-1.9
4,647,005	-				-0.2
4,647,035	+				+0.2
4,647,037	+				-1.3
4,647,045	-				-1.3
4,647,085	+				+0.4
4,647,085	+				+0.4
4,647,087	+				-0.8
4,647,087	+				-0.5
4,647,087	+				-1.4
4,647,087	+				-1.2
4,647,087	+				-1.9
4,647,087	+				+0.2
4,647,087	+				-1.4
4,647,087	+				-2.7
4,647,087	+				-0.6
4,647,087	+				-0.0
4,647,087	+				-0.1
4,647,087	+				-1.7
4,647,087	+				-0.8
4,647,087	+				-0.1
4,647,087	+				-1.5
4,647,087	+				-1.6
4,647,087	+				-1.1
4,647,087	+				+0.0
4,647,087	+				-0.3
4,647,087	+				+0.2
4,647,087	+				-0.2
4,647,087	+				-1.9
4,647,087	+				+0.4
4,647,087	+				+0.3
4,647,087	+				-0.6
4,647,087	+				-1.6
4,647,087	+				-0.5
4,647,087	+				-0.6
4,647,087	+				+0.3
4,647,087	+				+0.2
4,647,087	+				-0.7
4,647,087	+				-1.1
4,647,087	+				-0.8
4,647,087	+				-0.0
4,647,087	+				+0.5
4,647,087	+				-0.7
4,647,087	+				-0.1
4,647,087	+				-0.2
4,647,087	+				-1.4
4,647,087	+				-1.5
4,647,087	+				+1.2
4,647,087	+				-1.2
4,647,087	+				+0.5
4,647,087	+				-1.2
4,647,087	+				-1.1
4,647,087	+				-0.0
4,647,087	+				-0.4
4,647,095	-				-0.0
4,647,095	-				-2.4
4,647,095	-				-0.5
4,647,095	-				-1.1
4,647,095	-				+0.7
4,647,095	-				-1.2
4,647,095	-				+0.2
4,647,095	-				-0.8
4,647,095	-				-1.1
4,647,095	-				-1.9
4,647,095	-				-0.1
4,647,095	-				+0.0
4,647,095	-				-1.4
4,647,095	-				-1.1
4,647,095	-				-1.2
4,647,095	-				-1.6
4,647,095	-				-1.0
4,647,095	-				-1.0
4,647,095	-				-1.8
4,647,095	-				+0.0
4,647,095	-				+0.3
4,647,095	-				+0.4
4,647,095	-				+0.2
4,647,095	-				-1.3
4,647,095	-				+1.3
4,647,095	-				-0.5
4,647,095	-				-0.7
4,647,095	-				+0.8
4,647,095	-				-1.3
4,647,095	-				+0.1
4,647,095	-				-0.2
4,647,095	-				+0.3
4,647,095	-				-0.2
4,647,095	-				-0.1
4,647,095	-				-0.4
4,647,095	-				+0.1
4,647,095	-				-1.1
4,647,095	-				+0.4
4,647,095	-				+0.0
4,647,095	-				-0.3
4,647,095	-				-1.4
4,647,095	-				+0.0
4,647,097	+				-1.4
4,647,097	+				-0.7
4,647,097	+				-2.1
4,647,100	-				-0.1
4,647,105	-				-1.5
4,647,105	-				+0.1
4,647,105	-				-0.3
4,647,105	-				-1.5
4,647,105	-				-0.2
4,647,105	-				+0.3
4,647,145	+				-1.4
4,647,145	+				-1.6
4,647,230	-		Shewana3_3871	0.11	-0.4
4,647,231	-		Shewana3_3871	0.12	-0.2
4,647,231	-		Shewana3_3871	0.12	+0.7
4,647,232	-		Shewana3_3871	0.12	+0.7
4,647,233	-		Shewana3_3871	0.12	-1.1
4,647,233	-		Shewana3_3871	0.12	-0.5
4,647,349	+		Shewana3_3871	0.17	-1.3
4,647,350	+		Shewana3_3871	0.17	+0.1
4,647,358	-		Shewana3_3871	0.17	-0.5
4,647,367	-		Shewana3_3871	0.18	+0.1
4,647,371	+		Shewana3_3871	0.18	-0.7
4,647,377	-		Shewana3_3871	0.18	-1.5
4,647,377	-		Shewana3_3871	0.18	-1.9
4,647,453	+		Shewana3_3871	0.22	-0.5
4,647,453	+		Shewana3_3871	0.22	+0.5
4,647,544	-		Shewana3_3871	0.26	-0.2
4,647,547	-		Shewana3_3871	0.26	-0.9
4,647,553	+		Shewana3_3871	0.26	+0.1
4,647,564	+		Shewana3_3871	0.27	-0.1
4,647,604	-		Shewana3_3871	0.29	-0.4
4,647,612	-		Shewana3_3871	0.29	+0.2
4,647,622	-		Shewana3_3871	0.30	-0.0
4,647,629	+		Shewana3_3871	0.30	+0.1
4,647,715	+		Shewana3_3871	0.34	-0.8
4,647,723	+		Shewana3_3871	0.34	-1.0
4,647,757	+		Shewana3_3871	0.36	-0.2
4,648,005	+		Shewana3_3871	0.47	-0.1
4,648,131	+		Shewana3_3871	0.53	-0.4
4,648,152	-		Shewana3_3871	0.54	-1.4
4,648,231	+		Shewana3_3871	0.58	+0.4
4,648,244	+		Shewana3_3871	0.58	+0.2
4,648,261	-		Shewana3_3871	0.59	-0.3
4,648,280	-		Shewana3_3871	0.60	-1.4
4,648,349	+		Shewana3_3871	0.63	+0.1
4,648,386	-		Shewana3_3871	0.65	+0.9
4,648,420	+		Shewana3_3871	0.66	+0.3
4,648,428	-		Shewana3_3871	0.67	-0.2
4,648,428	-		Shewana3_3871	0.67	+0.3
4,648,429	-		Shewana3_3871	0.67	-0.6
4,648,448	-		Shewana3_3871	0.68	+0.5
4,648,448	-		Shewana3_3871	0.68	-1.2
4,648,457	+		Shewana3_3871	0.68	-0.3
4,648,466	-		Shewana3_3871	0.69	-0.4
4,648,478	-		Shewana3_3871	0.69	-1.6
4,648,483	-		Shewana3_3871	0.69	+0.0
4,648,520	+		Shewana3_3871	0.71	+0.2
4,648,536	+		Shewana3_3871	0.72	-0.1
4,648,542	-		Shewana3_3871	0.72	+0.2
4,648,580	+		Shewana3_3871	0.74	-0.5
4,648,635	+		Shewana3_3871	0.76	-0.1
4,648,635	+		Shewana3_3871	0.76	-0.8
4,648,643	-		Shewana3_3871	0.77	-1.0
4,648,643	-		Shewana3_3871	0.77	-1.8
4,648,704	+		Shewana3_3871	0.80	-0.8
4,648,709	+		Shewana3_3871	0.80	+0.1
4,648,709	+		Shewana3_3871	0.80	-0.9
4,648,723	-		Shewana3_3871	0.80	+0.0
4,648,724	-		Shewana3_3871	0.81	-1.1
4,648,726	-		Shewana3_3871	0.81	+0.3
4,648,745	+		Shewana3_3871	0.82	+0.4
4,648,745	+		Shewana3_3871	0.82	-0.2
4,648,745	+		Shewana3_3871	0.82	-0.1
4,648,753	-		Shewana3_3871	0.82	-0.2
4,648,754	-		Shewana3_3871	0.82	+0.5
4,648,783	+		Shewana3_3871	0.83	-0.1
4,648,783	+		Shewana3_3871	0.83	+0.6
4,648,783	+		Shewana3_3871	0.83	+0.1
4,648,783	+		Shewana3_3871	0.83	-0.7
4,648,783	+		Shewana3_3871	0.83	-0.1
4,648,783	+		Shewana3_3871	0.83	-1.2
4,648,784	+		Shewana3_3871	0.83	-1.0
4,648,784	+		Shewana3_3871	0.83	+0.2
4,648,784	-		Shewana3_3871	0.83	-0.2
4,648,791	-		Shewana3_3871	0.84	-0.1
4,648,791	-		Shewana3_3871	0.84	-0.9
4,648,791	-		Shewana3_3871	0.84	+0.3
4,648,791	-		Shewana3_3871	0.84	-0.7
4,648,791	-		Shewana3_3871	0.84	+0.3
4,648,791	-		Shewana3_3871	0.84	-1.3
4,648,791	-		Shewana3_3871	0.84	+0.0
4,648,792	-		Shewana3_3871	0.84	+0.8
4,648,792	-		Shewana3_3871	0.84	-0.3
4,648,792	-		Shewana3_3871	0.84	+0.3
4,648,803	-		Shewana3_3871	0.84	-0.2
4,648,809	-		Shewana3_3871	0.84	-1.4
4,648,861	+		Shewana3_3871	0.87	-0.1
4,648,877	+		Shewana3_3871	0.88	+0.8
4,648,882	+		Shewana3_3871	0.88	-0.2
4,648,882	+		Shewana3_3871	0.88	+0.1
4,648,890	-		Shewana3_3871	0.88	+0.2
4,648,896	+		Shewana3_3871	0.88	+0.2
4,648,941	+				-1.2
4,648,941	+				-1.4
4,648,955	+				-1.2
4,648,955	+				+0.5
4,648,956	-				-0.2
4,648,958	-				-0.2
4,648,958	-				-0.2
4,648,958	-				-2.0
4,648,963	+				-0.6
4,648,963	-				+0.2
4,648,964	+				+0.3
4,648,973	+				-0.7
4,648,973	+				-0.8
4,648,973	+				+0.3
4,648,973	+				+0.4
4,648,980	-				+0.1
4,648,981	-				+0.6
4,648,981	-				-1.4
4,648,981	-				-0.1
4,649,003	-				-0.5
4,649,005	+				+0.1
4,649,010	+				+0.4
4,649,018	-				-0.6
4,649,018	-				+0.3
4,649,040	+				+0.3
4,649,065	+				-0.2
4,649,080	+				-0.4
4,649,088	-				+0.1
4,649,088	-				-0.2
4,649,179	-				-0.4
4,649,297	+				-1.1
4,649,305	+				+0.3
4,649,305	-				+0.0
4,649,305	-				-0.8
4,649,313	-				-1.3
4,649,329	+				-1.7
4,649,376	+	potE	Shewana3_3872	0.11	+0.3
4,649,378	+	potE	Shewana3_3872	0.11	-0.5
4,649,378	+	potE	Shewana3_3872	0.11	-0.0
4,649,386	-	potE	Shewana3_3872	0.12	-0.7
4,649,392	+	potE	Shewana3_3872	0.12	-0.4
4,649,394	-	potE	Shewana3_3872	0.12	-1.1
4,649,394	-	potE	Shewana3_3872	0.12	+0.2
4,649,399	-	potE	Shewana3_3872	0.13	+0.0
4,649,400	-	potE	Shewana3_3872	0.13	+0.1
4,649,400	-	potE	Shewana3_3872	0.13	-1.8
4,649,491	+	potE	Shewana3_3872	0.20	-1.4
4,649,545	+	potE	Shewana3_3872	0.24	-2.2
4,649,558	-	potE	Shewana3_3872	0.25	+0.0
4,649,563	+	potE	Shewana3_3872	0.25	-1.0
4,649,645	-	potE	Shewana3_3872	0.31	-2.1
4,649,754	+	potE	Shewana3_3872	0.40	+0.2
4,649,762	-	potE	Shewana3_3872	0.40	-0.3
4,649,797	+	potE	Shewana3_3872	0.43	+0.1
4,649,874	+	potE	Shewana3_3872	0.49	+0.3
4,649,937	-	potE	Shewana3_3872	0.54	+0.3
4,650,018	-	potE	Shewana3_3872	0.60	+0.0
4,650,075	+	potE	Shewana3_3872	0.64	+0.2
4,650,077	+	potE	Shewana3_3872	0.64	-0.1
4,650,083	-	potE	Shewana3_3872	0.65	-0.3
4,650,130	+	potE	Shewana3_3872	0.68	+1.3
4,650,131	-	potE	Shewana3_3872	0.68	+0.5