Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2658

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_2657 and Shewana3_2658 are separated by 226 nucleotidesShewana3_2658 and Shewana3_2659 are separated by 260 nucleotides Shewana3_2657: Shewana3_2657 - PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq), at 3,170,350 to 3,172,215 _2657 Shewana3_2658: Shewana3_2658 - histone family protein DNA-binding protein (RefSeq), at 3,172,442 to 3,172,714 _2658 Shewana3_2659: Shewana3_2659 - Lon-A peptidase (RefSeq), at 3,172,975 to 3,175,332 _2659 Position (kb) 3172 3173Strain fitness (log2 ratio) -2 -1 0 1at 3171.615 kb on - strand, within Shewana3_2657at 3172.025 kb on - strand, within Shewana3_2657at 3172.897 kb on + strandat 3172.905 kb on - strandat 3173.565 kb on - strand, within Shewana3_2659

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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3,171,615 - Shewana3_2657 0.68 -0.4
3,172,025 - Shewana3_2657 0.90 -0.2
3,172,897 + -1.6
3,172,905 - -1.0
3,173,565 - Shewana3_2659 0.25 -1.8

Or see this region's nucleotide sequence