Strain Fitness in Shewanella loihica PV-4 around Shew_3816

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
4,543,131	-		Shew_3814	0.60	+0.5
4,543,131	-		Shew_3814	0.60	+0.3
4,543,131	-		Shew_3814	0.60	-0.1
4,543,131	-		Shew_3814	0.60	+0.3
4,543,156	+		Shew_3814	0.63	+0.6
4,543,278	-		Shew_3814	0.77	+0.4
4,543,649	-				-0.1
4,543,747	-		Shew_3815	0.12	-0.2
4,543,747	+		Shew_3815	0.12	-0.3
4,543,755	-		Shew_3815	0.17	+0.1
4,543,755	-		Shew_3815	0.17	+0.7
4,543,801	+		Shew_3815	0.41	-0.1
4,543,814	+		Shew_3815	0.47	+0.1
4,543,841	+		Shew_3815	0.61	-0.3
4,543,911	-				+0.5
4,544,183	-		Shew_3816	0.14	-0.7
4,544,403	-		Shew_3816	0.55	-0.7
4,544,408	-		Shew_3816	0.55	-1.5
4,544,413	-		Shew_3816	0.56	+0.1
4,544,506	+		Shew_3816	0.73	+0.0
4,544,507	-		Shew_3816	0.74	+0.2
4,544,538	-		Shew_3816	0.79	-0.6
4,544,608	-				+0.6
4,544,623	+				+0.1
4,544,771	+				+0.2
4,544,771	+				+0.4
4,544,771	+				+0.2
4,544,771	+				-0.1
4,544,779	-				+0.1
4,544,838	+		Shew_3817	0.25	+0.2
4,544,838	+		Shew_3817	0.25	-1.1
4,544,843	+		Shew_3817	0.26	-0.6
4,544,862	+		Shew_3817	0.31	-2.4
4,544,870	-		Shew_3817	0.34	+0.1
4,544,917	-		Shew_3817	0.47	-0.2
4,544,917	-		Shew_3817	0.47	-0.5
4,544,927	-		Shew_3817	0.50	-0.9
4,545,085	-				-0.3
4,545,125	+				+0.5
4,545,125	+				-0.9
4,545,178	+				-1.0
4,545,515	+		Shew_3818	0.18	-0.3
4,545,523	-		Shew_3818	0.18	+0.8