Strain Fitness in Shewanella loihica PV-4 around Shew_3434

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
4,099,783	-		Shew_3433	0.21	+0.6
4,099,992	+		Shew_3433	0.45	+0.5
4,100,001	+		Shew_3433	0.46	+2.4
4,100,007	+		Shew_3433	0.47	+0.3
4,100,156	-		Shew_3433	0.64	+0.6
4,100,162	+		Shew_3433	0.65	+0.6
4,100,231	+		Shew_3433	0.73	+0.2
4,100,277	-		Shew_3433	0.79	+0.4
4,100,510	+				-0.0
4,100,548	+				+0.2
4,100,580	+		Shew_3434	0.10	-1.0
4,100,598	+		Shew_3434	0.14	-0.6
4,100,857	+		Shew_3434	0.60	-1.0
4,100,864	+		Shew_3434	0.62	-1.2
4,100,864	+		Shew_3434	0.62	-0.5
4,100,865	-		Shew_3434	0.62	-1.1
4,100,865	-		Shew_3434	0.62	-0.8
4,100,865	-		Shew_3434	0.62	-2.6
4,100,872	-		Shew_3434	0.63	-1.2
4,100,899	+		Shew_3434	0.68	-0.8
4,100,928	+		Shew_3434	0.73	-1.5
4,100,945	-		Shew_3434	0.76	-1.4
4,100,967	-		Shew_3434	0.80	-1.3
4,101,081	-				+1.3
4,101,123	-				-0.1
4,101,156	-				-0.3
4,101,209	-				-0.6
4,101,314	+				+1.8