Strain Fitness in Shewanella loihica PV-4 around Shew_3087

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
3,666,423	-				+0.3
3,666,450	+				+0.7
3,666,457	+				+0.3
3,666,618	-		Shew_3086	0.25	+0.1
3,666,641	-		Shew_3086	0.27	-0.8
3,666,799	+		Shew_3086	0.44	+0.0
3,666,874	-		Shew_3086	0.51	-0.8
3,667,193	+		Shew_3086	0.84	-1.5
3,667,230	-		Shew_3086	0.87	-0.5
3,667,511	+				-0.6
3,667,703	+		Shew_3087	0.16	-0.7
3,667,994	-		Shew_3087	0.31	+0.6
3,668,132	-		Shew_3087	0.39	+0.3
3,668,172	+		Shew_3087	0.41	+2.8
3,668,172	+		Shew_3087	0.41	-0.3
3,668,510	+		Shew_3087	0.59	-0.4
3,668,555	-		Shew_3087	0.61	-0.5
3,668,568	-		Shew_3087	0.62	+0.1
3,668,568	-		Shew_3087	0.62	+0.2
3,668,652	+		Shew_3087	0.66	+0.8
3,668,652	+		Shew_3087	0.66	-0.6
3,668,660	-		Shew_3087	0.67	-0.3
3,668,671	+		Shew_3087	0.67	+0.1
3,668,712	-		Shew_3087	0.70	-0.8
3,668,726	-		Shew_3087	0.70	+0.3
3,668,988	+		Shew_3087	0.84	+0.1
3,668,991	-		Shew_3087	0.85	-0.2
3,669,302	-				+0.1
3,669,308	-				+0.1
3,669,403	-				-0.4
3,669,504	-				-0.5
3,669,534	+		Shew_3088	0.11	+0.4
3,669,825	-		Shew_3088	0.33	+0.4
3,669,949	-		Shew_3088	0.43	-0.5
3,669,971	-		Shew_3088	0.45	+0.2
3,670,015	+		Shew_3088	0.48	+0.6