Strain Fitness in Shewanella loihica PV-4 around Shew_3083

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
3,661,002	-		Shew_3082	0.44	-2.0
3,661,002	-		Shew_3082	0.44	-0.8
3,661,002	-		Shew_3082	0.44	-0.2
3,661,050	-		Shew_3082	0.47	-0.0
3,661,223	+		Shew_3082	0.59	-0.2
3,661,427	+		Shew_3082	0.73	+1.0
3,661,533	-		Shew_3082	0.80	+0.1
3,661,562	+		Shew_3082	0.82	+0.4
3,661,709	-				+0.8
3,661,777	-				-0.6
3,661,777	-				+1.7
3,662,001	+				-0.1
3,662,418	-		Shew_3083	0.29	-0.0
3,662,505	-		Shew_3083	0.35	-1.0
3,662,585	-		Shew_3083	0.41	+0.2
3,662,729	-		Shew_3083	0.51	-0.5
3,662,814	+		Shew_3083	0.57	-0.9
3,662,847	+		Shew_3083	0.59	+1.0
3,663,211	-		Shew_3083	0.84	-0.4
3,663,249	+		Shew_3083	0.87	-1.0
3,663,249	+		Shew_3083	0.87	+0.1
3,663,281	+		Shew_3083	0.89	+0.8
3,663,333	+				+0.1
3,663,523	+				-0.5
3,663,523	+				+0.2
3,663,561	+				+0.6
3,663,571	+				-0.2
3,663,750	-				-0.2
3,663,852	+				-0.1
3,663,860	-				+0.9
3,664,257	+		Shew_3084	0.31	+0.1
3,664,354	+		Shew_3084	0.37	-0.8