Strain Fitness in Shewanella loihica PV-4 around Shew_3078

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
3,651,624	+		Shew_3077	0.61	+0.4
3,651,684	+		Shew_3077	0.65	+0.4
3,651,814	+		Shew_3077	0.73	+0.1
3,651,822	-		Shew_3077	0.73	-0.0
3,651,934	+		Shew_3077	0.80	-0.1
3,652,050	-		Shew_3077	0.88	-0.1
3,652,381	+				-1.5
3,652,419	-				+0.3
3,652,491	-				-0.1
3,652,528	+				+1.3
3,652,528	+				-1.9
3,652,598	+		Shew_3078	0.13	+0.3
3,652,631	+		Shew_3078	0.15	+0.2
3,652,639	-		Shew_3078	0.16	+0.5
3,652,670	+		Shew_3078	0.18	+0.2
3,652,810	-		Shew_3078	0.27	+0.4
3,652,853	+		Shew_3078	0.30	-0.5
3,652,892	-		Shew_3078	0.32	-0.2
3,652,910	+		Shew_3078	0.33	+1.3
3,652,928	-		Shew_3078	0.35	+0.5
3,653,048	+		Shew_3078	0.42	+0.1
3,653,169	+		Shew_3078	0.50	+0.2
3,653,288	+		Shew_3078	0.58	+1.5
3,653,590	-		Shew_3078	0.77	+0.7
3,653,803	-				+0.5
3,654,378	+		Shew_3079	0.19	+0.3
3,654,413	+		Shew_3079	0.21	+0.1
3,654,421	-		Shew_3079	0.21	-0.0
3,654,427	+		Shew_3079	0.22	+0.1
3,654,826	+		Shew_3079	0.40	+0.7
3,654,859	+		Shew_3079	0.41	-0.1