Strain Fitness in Shewanella loihica PV-4 around Shew_2820

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
3,340,149	+		Shew_2818	0.58	-0.1
3,340,308	+		Shew_2818	0.77	+1.3
3,340,334	+		Shew_2818	0.81	+2.4
3,340,334	+		Shew_2818	0.81	+0.2
3,340,503	+				+0.5
3,340,575	-		Shew_2819	0.34	+0.4
3,340,603	+		Shew_2819	0.44	+0.9
3,340,740	-				+0.2
3,340,778	+				+0.4
3,340,791	+				-0.4
3,341,537	-	prfC	Shew_2820	0.33	-1.1
3,341,712	+	prfC	Shew_2820	0.44	-0.6
3,342,248	+	prfC	Shew_2820	0.78	-0.4
3,342,796	+				+0.1
3,342,796	+				-0.2
3,343,221	-		Shew_2821	0.47	-0.9
3,343,300	-		Shew_2821	0.56	+0.2
3,343,487	+		Shew_2821	0.77	-0.8
3,343,487	+		Shew_2821	0.77	+0.8
3,343,495	-		Shew_2821	0.78	-2.6
3,343,573	+		Shew_2821	0.87	-0.9